RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 DUSP28Q4G0W2 176 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 C18orf63Q68DL7 685 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 LCN10Q6JVE6 187 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 PAPD4Q6PIY7 484 aaKnown RBP4.88□□□□□ -1.63
CDC27-219ENST00000576484 GFRALQ6UXV0 394 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 FASTKD5Q7L8L6 764 aaKnown RBP4.88□□□□□ -1.63
CDC27-219ENST00000576484 ATG9AQ7Z3C6 839 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 TMEM219Q86XT9 240 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 TEX11Q8IYF3 940 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 HM13Q8TCT9 377 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 TRPC4APQ8TEL6 797 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 SLC44A1Q8WWI5 657 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 ABTB1Q969K4 478 aaPredicted RBP4.88□□□□□ -1.63
CDC27-219ENST00000576484 IL17FQ96PD4 163 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 EBF2Q9HAK2 575 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 LRRC4Q9HBW1 653 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 EPB41L5Q9HCM4 733 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 TMEM30AQ9NV96 361 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 UBA2Q9UBT2 640 aaPredicted RBP4.88□□□□□ -1.63
CDC27-219ENST00000576484 VPS28Q9UK41 221 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 FBXL2Q9UKC9 423 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 ZNF215Q9UL58 517 aaPredicted RBP4.88□□□□□ -1.63
CDC27-219ENST00000576484 PADI1Q9ULC6 663 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 PROCRQ9UNN8 238 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
CDC27-219ENST00000576484 ARHGEF40Q8TER5 1519 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 A0A1B0GUV1 79 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 EIF4E1BA6NMX2 242 aaKnown RBP4.87□□□□□ -1.63
CDC27-219ENST00000576484 CDRT15L2A8MXV6 281 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 MAP2K7O14733 419 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 HS3ST1O14792 307 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 CLGNO14967 610 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 ANKRD28O15084 1053 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 SLC16A5O15375 505 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 GFPT2O94808 682 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 TGFB3P10600 412 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 ITGA2P17301 1181 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 PON1P27169 355 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 HOXA13P31271 388 aaPredicted RBP4.87□□□□□ -1.63
CDC27-219ENST00000576484 GPR143P51810 404 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 PDE1BQ01064 536 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 SPOCK1Q08629 439 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 PDE1CQ14123 709 aaPredicted RBP4.87□□□□□ -1.63
CDC27-219ENST00000576484 GPR180Q86V85 440 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 HACE1Q8IYU2 909 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 SLC38A5Q8WUX1 472 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 SORCS1Q8WY21 1168 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 CTAGE1Q96RT6 745 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 SMC6Q96SB8 1091 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 SMARCAD1Q9H4L7 1026 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 PAG1Q9NWQ8 432 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 ADD3Q9UEY8 706 aaKnown RBP4.87□□□□□ -1.63
CDC27-219ENST00000576484 NENFQ9UMX5 172 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 LRP12Q9Y561 859 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 PTPRCP08575 1304 aa4.87□□□□□ -1.63
CDC27-219ENST00000576484 IGHV4OR15-8A0A075B7B6 117 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 A0A1W2PR77 199 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 TULP2O00295 520 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 KCNN4O15554 427 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 SNRNP70P08621 437 aaKnown RBP4.86□□□□□ -1.63
CDC27-219ENST00000576484 ACTN1P12814 892 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 ALOX12P18054 663 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 HIST1H2ADP20671 130 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 UGT1A1P22309 533 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 CLNS1AP54105 237 aaKnown RBP4.86□□□□□ -1.63
CDC27-219ENST00000576484 RRP1P56182 461 aaKnown RBP4.86□□□□□ -1.63
CDC27-219ENST00000576484 ISL1P61371 349 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 AIMP2Q13155 320 aaKnown RBP4.86□□□□□ -1.63
CDC27-219ENST00000576484 CCDC96Q2M329 555 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 KRTCAP3Q53RY4 240 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 SPATA1Q5VX52 437 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 SPSB3Q6PJ21 355 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 SFR1Q86XK3 245 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 RNF113BQ8IZP6 322 aaKnown RBP4.86□□□□□ -1.63
CDC27-219ENST00000576484 RASGEF1CQ8N431 466 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 SPATA20Q8TB22 786 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 THAP6Q8TBB0 222 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 PIGTQ969N2 578 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 NSUN4Q96CB9 384 aaKnown RBP4.86□□□□□ -1.63
CDC27-219ENST00000576484 DUX5Q96PT3 197 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 SIL1Q9H173 461 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 OR2W1Q9Y3N9 320 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 CMAHPQ9Y471 501 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 CNTNAP2Q9UHC6 1331 aa4.86□□□□□ -1.63
CDC27-219ENST00000576484 A0A1W2PP11 408 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 LILRA5A6NI73 299 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 PRAC2D3DTV9 90 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 SMAD9O15198 467 aaKnown RBP4.85□□□□□ -1.63
CDC27-219ENST00000576484 PLPP2O43688 288 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 TUBBP07437 444 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 MSH2P43246 934 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 ILF3Q12906 894 aaKnown RBP eCLIP4.85□□□□□ -1.63
CDC27-219ENST00000576484 ACVR2BQ13705 512 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 RAB41Q5JT25 222 aa4.85□□□□□ -1.63
CDC27-219ENST00000576484 RARS2Q5T160 578 aaKnown RBP4.85□□□□□ -1.63
CDC27-219ENST00000576484 UNQ6126/PRO20091Q6UXV3 157 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms