RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 TRIM39Q9HCM9 518 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 SPATS2LQ9NUQ6 558 aaKnown RBP15.11■□□□□ 0.01
SMG6-220ENST00000576218 PLEKHM1Q9Y4G2 1056 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 ARL5AQ9Y689 179 aa15.11■□□□□ 0.01
SMG6-220ENST00000576218 MTX2O75431 263 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 TCEA3O75764 348 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 ECEL1O95672 775 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 FGGP02679 453 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 FUCA1P04066 466 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 SLC2A4P14672 509 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 AKT1P31749 480 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 STIP1P31948 543 aaKnown RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 GDF10P55107 478 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 MAZP56270 477 aaKnown RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 OLIG2Q13516 323 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 TAF1AQ15573 450 aaPredicted RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 LONRF2Q1L5Z9 754 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 CERCAMQ5T4B2 595 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 NRROSQ86YC3 692 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 CCNJLQ8IV13 435 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 TTC30BQ8N4P2 665 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 SCARF2Q96GP6 870 aaPredicted RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 GORASP1Q9BQQ3 440 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 ATXN10Q9UBB4 475 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 CNOT6Q9ULM6 557 aaKnown RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 KCNK6Q9Y257 313 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 RNF215Q9Y6U7 377 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 IGF2RP11717 2491 aa15.1■□□□□ 0.01
SMG6-220ENST00000576218 MAP1BP46821 2468 aaKnown RBP15.1■□□□□ 0.01
SMG6-220ENST00000576218 AKAP13Q12802 2813 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 GPR89AB7ZAQ6 455 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 NUDT21O43809 227 aaKnown RBP15.09■□□□□ 0.01
SMG6-220ENST00000576218 VEGFDO43915 354 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 NUAK1O60285 661 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 NOBOXO60393 691 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 DNAJC6O75061 913 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 CDK14O94921 469 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 PRAMEF1O95521 474 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 GPR89BP0CG08 455 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 ZNF8P17098 575 aaPredicted RBP15.09■□□□□ 0.01
SMG6-220ENST00000576218 VCLP18206 1134 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 ALDH4A1P30038 563 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 CXCR5P32302 372 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 TMPRSS15P98073 1019 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 HLTFQ14527 1009 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMG6-220ENST00000576218 CHRNA6Q15825 494 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 AMZ1Q400G9 498 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 MAP9Q49MG5 647 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 ATP13A5Q4VNC0 1218 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 FOXR1Q6PIV2 292 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 OGFOD3Q6PK18 319 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 PPP1R21Q6ZMI0 780 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 LINC00523Q86TU6 105 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 LRRTM4Q86VH4 590 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 TRAPPC5Q8IUR0 188 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 CACTIN-AS1Q8N1I8 211 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 DNAAF3Q8N9W5 541 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 KDF1Q8NAX2 398 aaPredicted RBP15.09■□□□□ 0.01
SMG6-220ENST00000576218 OR4K2Q8NGD2 314 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 NRSN2Q9GZP1 204 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 IL26Q9NPH9 171 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 KLC4Q9NSK0 619 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 IL17CQ9P0M4 197 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 PCDHB1Q9Y5F3 818 aa15.09■□□□□ 0.01
SMG6-220ENST00000576218 TRBV23OR9-2A0A075B6M9 112 aa15.08■□□□□ 0
SMG6-220ENST00000576218 KMOO15229 486 aa15.08■□□□□ 0
SMG6-220ENST00000576218 METTL18O95568 372 aa15.08■□□□□ 0
SMG6-220ENST00000576218 MSH3P20585 1137 aa15.08■□□□□ 0
SMG6-220ENST00000576218 ADRA1AP35348 466 aa15.08■□□□□ 0
SMG6-220ENST00000576218 FDFT1P37268 417 aa15.08■□□□□ 0
SMG6-220ENST00000576218 CCL7P80098 99 aa15.08■□□□□ 0
SMG6-220ENST00000576218 CAMK2BQ13554 666 aa15.08■□□□□ 0
SMG6-220ENST00000576218 ISXQ2M1V0 245 aa15.08■□□□□ 0
SMG6-220ENST00000576218 C3orf38Q5JPI3 329 aa15.08■□□□□ 0
SMG6-220ENST00000576218 LDLRAP1Q5SW96 308 aa15.08■□□□□ 0
SMG6-220ENST00000576218 CDCP2Q5VXM1 449 aa15.08■□□□□ 0
SMG6-220ENST00000576218 RANBP10Q6VN20 620 aa15.08■□□□□ 0
SMG6-220ENST00000576218 ADGRG6Q86SQ4 1221 aa15.08■□□□□ 0
SMG6-220ENST00000576218 SFTPA2Q8IWL1 248 aa15.08■□□□□ 0
SMG6-220ENST00000576218 BRSK1Q8TDC3 778 aa15.08■□□□□ 0
SMG6-220ENST00000576218 PATE1Q8WXA2 126 aa15.08■□□□□ 0
SMG6-220ENST00000576218 VPS35Q96QK1 796 aa15.08■□□□□ 0
SMG6-220ENST00000576218 STRADBQ9C0K7 418 aa15.08■□□□□ 0
SMG6-220ENST00000576218 LRRN3Q9H3W5 708 aa15.08■□□□□ 0
SMG6-220ENST00000576218 EPB41L5Q9HCM4 733 aa15.08■□□□□ 0
SMG6-220ENST00000576218 RABGEF1Q9UJ41 708 aa15.08■□□□□ 0
SMG6-220ENST00000576218 CRLS1Q9UJA2 301 aa15.08■□□□□ 0
SMG6-220ENST00000576218 APPL1Q9UKG1 709 aa15.08■□□□□ 0
SMG6-220ENST00000576218 DNAJC16Q9Y2G8 782 aa15.08■□□□□ 0
SMG6-220ENST00000576218 EPG5Q9HCE0 2579 aa15.07■□□□□ 0
SMG6-220ENST00000576218 PDZK1P1A8MUH7 402 aa15.07■□□□□ 0
SMG6-220ENST00000576218 KIF5CO60282 957 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A9O60656 530 aa15.07■□□□□ 0
SMG6-220ENST00000576218 AP2A1O95782 977 aa15.07■□□□□ 0
SMG6-220ENST00000576218 PNLIPP16233 465 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A6P19224 532 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A1P22309 533 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A4P22310 534 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A3P35503 534 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms