RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 ARRB1P49407 418 aaPredicted RBP14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 BLKP51451 505 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 TUBB4BP68371 445 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 BNC1Q01954 994 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 PPARDQ03181 441 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 NFATC2Q13469 925 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 GTF2H3Q13889 308 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 FZD2Q14332 565 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 HLA-BQ31612 363 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 GPR33Q49SQ1 333 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 MSS51Q4VC12 460 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ZNF542PQ5EBM4 170 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 LDLRAP1Q5SW96 308 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 TPRG1LQ5T0D9 272 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 PRR23CQ6ZRP0 262 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 HID1Q8IV36 788 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ANKMY2Q8IV38 441 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 OR56A4Q8NGH8 313 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 OR4L1Q8NH43 312 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 SEC14L1Q92503 715 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 CFAP36Q96G28 342 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ELF4Q99607 663 aaPredicted RBP14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 FAM129AQ9BZQ8 928 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ZCCHC2Q9C0B9 1178 aaKnown RBP14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ERVMER34-1Q9H9K5 563 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 TRIM39Q9HCM9 518 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ARFGAP3Q9NP61 516 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 SAYSD1Q9NPB0 183 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 PARD6AQ9NPB6 346 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 TREX1Q9NSU2 369 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 ZC3H7BQ9UGR2 993 aaKnown RBP14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 TMEM98Q9Y2Y6 226 aa14.39□□□□□ -0.11
NPLOC4-218ENST00000574964 LNP1A1A4G5 178 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 TMEM202A6NGA9 273 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 OR51F1A6NGY5 319 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 GAPDHSO14556 408 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 TNFRSF10CO14798 259 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 TP73O15350 636 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 EIF3HO15372 352 aaKnown RBP eCLIP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 GPR39O43194 453 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 USP1O94782 785 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 RASGRP1O95267 797 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 VAPBO95292 243 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 TTC4O95801 387 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 RALBP11234 206 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 CTSEP14091 401 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 JUNDP17535 347 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 MSH3P20585 1137 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 PSMA3P25788 255 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 PPARGP37231 505 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 SRP54P61011 504 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 ACVR1Q04771 509 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 CUL1Q13616 776 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 THOC5Q13769 683 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 SPANXN3Q5MJ09 141 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 GPRC6AQ5T6X5 926 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 KIAA0930Q6ICG6 404 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 ZDHHC24Q6UX98 284 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 CEP128Q6ZU80 1094 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 MARK2Q7KZI7 788 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 PALM2Q8IXS6 379 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 ZBED8Q8IZ13 594 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 MINDY1Q8N5J2 469 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 PYROXD1Q8WU10 500 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 TSACCQ96A04 125 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 FAM122AQ96E09 287 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 DCUN1D1Q96GG9 259 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 COX14Q96I36 57 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 TRIM56Q9BRZ2 755 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 SLC13A1Q9BZW2 595 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 CYP4F12Q9HCS2 524 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 GPR27Q9NS67 375 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 CATSPERZQ9NTU4 200 aa14.38□□□□□ -0.11
NPLOC4-218ENST00000574964 CFAP99D6REC4 459 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 E7ESA3 106 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 CD3EAPO15446 510 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 YKT6O15498 198 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 VEGFDO43915 354 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 MTX2O75431 263 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 CDK14O94921 469 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 POLD2P49005 469 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 CCT8P50990 548 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 EIF2B5Q13144 721 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 SMAD1Q15797 465 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 LONRF1Q17RB8 773 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 ZNF423Q2M1K9 1284 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 AARS2Q5JTZ9 985 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 ZNF648Q5T619 568 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 LYPLAL1Q5VWZ2 237 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 SDCCAG8Q86SQ7 713 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 TMEM135Q86UB9 458 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 SERPINA9Q86WD7 417 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 PHACTR4Q8IZ21 702 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 AGGF1Q8N302 714 aaeCLIP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 NXPE1Q8N323 547 aa14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
NPLOC4-218ENST00000574964 FBXO36Q8NEA4 188 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms