RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 TCEAL2Q9H3H9 227 aaPredicted RBP32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A7Q9HAW7 530 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A10Q9HAW8 530 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UGT1A8Q9HAW9 530 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 MRM3Q9HC36 420 aaKnown RBP32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 TRIM39Q9HCM9 518 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 CYP4F12Q9HCS2 524 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 UTP11Q9Y3A2 253 aaKnown RBP32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 SLC30A1Q9Y6M5 507 aa32.82■■■□□ 2.84
CTDNEP1-209ENST00000574205 PLXNB3Q9ULL4 1909 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SDR42E2A6NKP2 422 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 AGAP14A8MT82 685 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 ESPNB1AK53 854 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 IVLP07476 585 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 CD59P13987 128 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 ITGALP20701 1170 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SDHBP21912 280 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 RPL21P46778 160 aaKnown RBP32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 C8orf74Q6P047 294 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SNX20Q7Z614 316 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 GATAD2AQ86YP4 633 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 CEP112Q8N8E3 955 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 BBOF1Q8ND07 529 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 ZNF548Q8NEK5 533 aaPredicted RBP32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SCARF2Q96GP6 870 aaPredicted RBP32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 CAAP1Q9H8G2 361 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SPASTQ9UBP0 616 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SLC2A6Q9UGQ3 507 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SNX24Q9Y343 169 aa32.81■■■□□ 2.84
CTDNEP1-209ENST00000574205 SLC30A4O14863 429 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 FLRT2O43155 660 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 POLD2P49005 469 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 ARSDP51689 593 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 ITGA8P53708 1063 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 PRRT3Q5FWE3 981 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 KANSL1Q7Z3B3 1105 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 GDAP1Q8TB36 358 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 SUDS3Q9H7L9 328 aaPredicted RBP32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 CARS2Q9HA77 564 aaKnown RBP32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 SUFUQ9UMX1 484 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 SOX13Q9UN79 622 aa32.8■■■□□ 2.84
CTDNEP1-209ENST00000574205 FUCA1P04066 466 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 GPR33Q49SQ1 333 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 LDLRAP1Q5SW96 308 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 DUPD1Q68J44 220 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 MMGT1Q8N4V1 131 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 DDHD1Q8NEL9 900 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 LRRC61Q9BV99 259 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 ARFGAP3Q9NP61 516 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 SAMD15Q9P1V8 674 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 ANAPC5Q9UJX4 755 aa32.79■■■□□ 2.84
CTDNEP1-209ENST00000574205 MAGEB16A2A368 324 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 GPR89AB7ZAQ6 455 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 GPR89BP0CG08 455 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 CTSEP14091 401 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 CASC4Q6P4E1 433 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 MPP5Q8N3R9 675 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 SLC25A45Q8N413 288 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 RMI1Q9H9A7 625 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 TREX1Q9NSU2 369 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 UCKL1Q9NWZ5 548 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 WHRNQ9P202 907 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 ATXN10Q9UBB4 475 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 CRLS1Q9UJA2 301 aa32.78■■■□□ 2.84
CTDNEP1-209ENST00000574205 NEMP2A6NFY4 417 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 TP73O15350 636 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 AQP9O43315 295 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 VEGFDO43915 354 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 DEKP35659 375 aaKnown RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 CALCOCO2Q13137 446 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 RSPO4Q2I0M5 234 aaPredicted RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 INAVAQ3KP66 663 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 GPRC6AQ5T6X5 926 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 LMX1AQ8TE12 382 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 HDAC10Q969S8 669 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 ULK4Q96C45 1275 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 LRRC1Q9BTT6 524 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 OR2AG1Q9H205 316 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 DPH5Q9H2P9 285 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 CSNK1G3Q9Y6M4 447 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 DNAJC6O75061 913 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 MTX2O75431 263 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 CA5AP35218 305 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 GRK6P43250 576 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 PRAMEP78395 509 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 CACNG1Q06432 222 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 MARK2Q7KZI7 788 aaKnown RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 ADGRG6Q86SQ4 1221 aa32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 FSTL5Q8N475 847 aaPredicted RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 ZCCHC2Q9C0B9 1178 aaKnown RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 TRNAU1APQ9NX07 287 aaKnown RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 ARID1BQ8NFD5 2236 aaPredicted RBP32.77■■■□□ 2.84
CTDNEP1-209ENST00000574205 CCDC162PA2VCL2 907 aa32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 NUAK1O60285 661 aa32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 NMBRP28336 390 aa32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 GNPDA1P46926 289 aa32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 ELOCQ15369 112 aa32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 KHDC1Q4VXA5 237 aaKnown RBP32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 ZRANB3Q5FWF4 1079 aa32.76■■■□□ 2.83
CTDNEP1-209ENST00000574205 ZNF648Q5T619 568 aaPredicted RBP32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms