RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 NLGN3Q9NZ94 848 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 BFARQ9NZS9 450 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 VPS18Q9P253 973 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 KLF15Q9UIH9 416 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 PCOLCE2Q9UKZ9 415 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 RIMKLBQ9ULI2 386 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 CNOT6Q9ULM6 557 aaKnown RBP10.94□□□□□ -0.66
CHD3-216ENST00000573936 DOLKQ9UPQ8 538 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SLC17A4Q9Y2C5 497 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 NEU2Q9Y3R4 380 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 LRRK1Q38SD2 2015 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 KNL1Q8NG31 2342 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 DOCK9Q9BZ29 2069 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 FADS2P1A8MWK0 482 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 H7C0S8 307 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 TAF4O00268 1085 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 NDC80O14777 642 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 LDB2O43679 373 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 BUD23O43709 281 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 VEGFDO43915 354 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 URI1O94763 535 aaPredicted RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 LDOC1O95751 146 aaPredicted RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 ANXA6P08133 673 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 ADCY8P40145 1251 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 ZNF140P52738 457 aaPredicted RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 DR1Q01658 176 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 CKAP4Q07065 602 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 PTK6Q13882 451 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 SEPT6Q14141 434 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 DHX34Q14147 1143 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 TRIP6Q15654 476 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 CHRNA6Q15825 494 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 PCID2Q5JVF3 399 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 LDLRAP1Q5SW96 308 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 CERCAMQ5T4B2 595 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 PROSER1Q86XN7 944 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 KLHL7Q8IXQ5 586 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 SLC25A45Q8N413 288 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 EID2Q8N6I1 236 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 ZNF548Q8NEK5 533 aaPredicted RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 PPHLN1Q8NEY8 458 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 OR13C4Q8NGS5 318 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 OR4C6Q8NH72 309 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 PEX13Q92968 403 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 GLMNQ92990 594 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 ULK4Q96C45 1275 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 CAMK1GQ96NX5 476 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 IL22Q9GZX6 179 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 CARS2Q9HA77 564 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 FGF22Q9HCT0 170 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 UCKL1Q9NWZ5 548 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 TRNAU1APQ9NX07 287 aaKnown RBP10.93□□□□□ -0.66
CHD3-216ENST00000573936 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 FTSJ1Q9UET6 329 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 ASIC3Q9UHC3 531 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 SUFUQ9UMX1 484 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 TMEM98Q9Y2Y6 226 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 SLC30A1Q9Y6M5 507 aa10.93□□□□□ -0.66
CHD3-216ENST00000573936 APC2O95996 2303 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 IGSF10Q6WRI0 2623 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 FAM221BA6H8Z2 402 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 MROH6A6NGR9 719 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 LMO7DNF2Z398 122 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 SMAPO00193 183 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 TNFSF14O43557 240 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 CBFA2T3O75081 653 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 SRP72O76094 671 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 PRAMEF1O95521 474 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 MLNP12872 115 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 ITGALP20701 1170 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 PSMA3P25788 255 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GRIA1P42261 906 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GNPDA1P46926 289 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 DUSP3P51452 185 aaPredicted RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 TMPRSS15P98073 1019 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 ILF3Q12906 894 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHD3-216ENST00000573936 C1orf61Q13536 156 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GTF2H3Q13889 308 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 KCNJ11Q14654 390 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 ATP13A5Q4VNC0 1218 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 DNTTIP2Q5QJE6 756 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 DOK6Q6PKX4 331 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 FAM151BQ6UXP7 276 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 MAATS1Q7Z4T9 603 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GLRX5Q86SX6 157 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GALNT13Q8IUC8 556 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 PPIL6Q8IXY8 311 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 RBFAQ8N0V3 343 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 FAM181AQ8N9Y4 354 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 MCUQ8NE86 351 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 SPATA4Q8NEY3 305 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 GDAP1Q8TB36 358 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 BAHD1Q8TBE0 780 aaPredicted RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 HEXDCQ8WVB3 486 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 CPT1BQ92523 772 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 PDXPQ96GD0 296 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 CDKN2AIPNLQ96HQ2 116 aa10.92□□□□□ -0.66
CHD3-216ENST00000573936 CNDP2Q96KP4 475 aaKnown RBP10.92□□□□□ -0.66
CHD3-216ENST00000573936 TTC25Q96NG3 672 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms