RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SPATA22Q8NHS9 363 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 SEC14L1Q92503 715 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 MS4A14Q96JA4 679 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 HIC2Q96JB3 615 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 TEKT5Q96M29 485 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 CCDC3Q9BQI4 270 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 RHOXF2Q9BQY4 288 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 LRRC1Q9BTT6 524 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 RIOK2Q9BVS4 552 aaKnown RBP9.03□□□□□ -0.96
NDE1-207ENST00000573203 FUT8Q9BYC5 575 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 FRMD8Q9BZ67 464 aaPredicted RBP9.03□□□□□ -0.96
NDE1-207ENST00000573203 NRSN2Q9GZP1 204 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 SYNDIG1Q9H7V2 258 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 UBP1Q9NZI7 540 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 PKD2L2Q9NZM6 624 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 KLHL8Q9P2G9 620 aaPredicted RBP9.03□□□□□ -0.96
NDE1-207ENST00000573203 DKK4Q9UBT3 224 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 SUFUQ9UMX1 484 aa9.03□□□□□ -0.96
NDE1-207ENST00000573203 PACSIN2Q9UNF0 486 aaPredicted RBP9.03□□□□□ -0.96
NDE1-207ENST00000573203 ANKRD11Q6UB99 2663 aaPredicted RBP9.03□□□□□ -0.96
NDE1-207ENST00000573203 RGSL1A5PLK6 1076 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 B4DGG1 531 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 APOC4-APOC2K7ER74 178 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 INPP4BO15327 924 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 CSO75390 466 aaKnown RBP9.02□□□□□ -0.97
NDE1-207ENST00000573203 PMPCBO75439 489 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 ASMTLO95671 621 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 SOD1P00441 154 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 APOC2P02655 101 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 SLC4A1P02730 911 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 IVLP07476 585 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 PIRTP0C851 137 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 TNNT3P45378 269 aaPredicted RBP9.02□□□□□ -0.97
NDE1-207ENST00000573203 POLD2P49005 469 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 SPINT3P49223 89 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 WASHC5Q12768 1159 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 RTP5Q14D33 572 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 NOMO1Q15155 1222 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 CYP1B1Q16678 543 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 C8orf74Q6P047 294 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 EMBQ6PCB8 327 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 RBM44Q6ZP01 1051 aaKnown RBP9.02□□□□□ -0.97
NDE1-207ENST00000573203 PID1Q7Z2X4 250 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 LYSMD3Q7Z3D4 306 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 TRIM74Q86UV6 250 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 OR6C4Q8NGE1 309 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 CCL4L1Q8NHW4 92 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 WDR48Q8TAF3 677 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 GPBAR1Q8TDU6 330 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 HTR3CQ8WXA8 447 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 ALG3Q92685 438 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 CCDC74AQ96AQ1 378 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 TADA1Q96BN2 335 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 QKIQ96PU8 341 aaKnown RBP eCLIP9.02□□□□□ -0.97
NDE1-207ENST00000573203 TRIB3Q96RU7 358 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 AGAP2Q99490 1192 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 VAT1Q99536 393 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 FERMT1Q9BQL6 677 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 GSDMCQ9BYG8 508 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 OSBPL8Q9BZF1 889 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 GPR63Q9BZJ6 419 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 DPEP2Q9H4A9 486 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 FAM83DQ9H4H8 585 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 ZFYVE1Q9HBF4 777 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 MAGEE1Q9HCI5 957 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 HOMER3Q9NSC5 361 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 FAM153AQ9UHL3 310 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 DMGDHQ9UI17 866 aaKnown RBP9.02□□□□□ -0.97
NDE1-207ENST00000573203 SHOC2Q9UQ13 582 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 SLC17A4Q9Y2C5 497 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 TMEM98Q9Y2Y6 226 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 GPSM3Q9Y4H4 160 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 ZFC3H1O60293 1989 aaKnown RBP9.02□□□□□ -0.97
NDE1-207ENST00000573203 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.97
NDE1-207ENST00000573203 ACACAQ13085 2346 aa9.02□□□□□ -0.97
NDE1-207ENST00000573203 GOLGA6L10A0A0M3HER8 536 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 F5H423 210 aaPredicted RBP9.01□□□□□ -0.97
NDE1-207ENST00000573203 USP12O75317 370 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 TCEA3O75764 348 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 NDST3O95803 873 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 FGGP02679 453 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 FUCA1P04066 466 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 NFKB1P19838 968 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 AK4P27144 223 aaPredicted RBP9.01□□□□□ -0.97
NDE1-207ENST00000573203 RBL1P28749 1068 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
NDE1-207ENST00000573203 ADCY8P40145 1251 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 WNT3AP56704 352 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 OTUD4Q01804 1114 aaKnown RBP9.01□□□□□ -0.97
NDE1-207ENST00000573203 C2orf54Q08AI8 447 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 XRCC4Q13426 336 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 PEX6Q13608 980 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 CUL1Q13616 776 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 DHX34Q14147 1143 aaKnown RBP9.01□□□□□ -0.97
NDE1-207ENST00000573203 SPIDRQ14159 915 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 HENMT1Q5T8I9 393 aaKnown RBP9.01□□□□□ -0.97
NDE1-207ENST00000573203 OGFOD3Q6PK18 319 aa9.01□□□□□ -0.97
NDE1-207ENST00000573203 SLC30A9Q6PML9 568 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms