RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 TAZQ16635 292 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 TEX44Q53QW1 395 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 ZNF569Q5MCW4 686 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.15■□□□□ 0.34
LITAF-211ENST00000572255 TMEM164Q5U3C3 297 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 GPR26Q8NDV2 337 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 SLC38A3Q99624 504 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 GPR63Q9BZJ6 419 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 B3GNT4Q9C0J1 378 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 ZMYND15Q9H091 742 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 CARD9Q9H257 536 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 ARFGAP3Q9NP61 516 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 RAD18Q9NS91 495 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 TMEM9Q9P0T7 183 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 ATXN10Q9UBB4 475 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 NFKBIL1Q9UBC1 381 aaPredicted RBP17.15■□□□□ 0.34
LITAF-211ENST00000572255 SAE1Q9UBE0 346 aaPredicted RBP17.15■□□□□ 0.34
LITAF-211ENST00000572255 ZNF711Q9Y462 761 aa17.15■□□□□ 0.34
LITAF-211ENST00000572255 COL6A6A6NMZ7 2263 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 A0A0A6YYK5 440 aaPredicted RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 A6NCN8 305 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 GRID2O43424 1007 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 PSTPIP1O43586 416 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 SNX2O60749 519 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 NDST3O95803 873 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 MT-CYBP00156 380 aaPredicted RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 THRAP10827 490 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 FGF3P11487 239 aaPredicted RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 PECAM1P16284 738 aaPredicted RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 MPSTP25325 297 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 PTPN3P26045 913 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 CD82P27701 267 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 PPM1FP49593 454 aaPredicted RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 HADHBP55084 474 aaKnown RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 HHEXQ03014 270 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 LY6DQ14210 128 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 LLGL1Q15334 1064 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 ZNF648Q5T619 568 aaPredicted RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 IYDQ6PHW0 289 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 SPOCD1Q6ZMY3 1216 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 BZW1Q7L1Q6 419 aaKnown RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 TMC3Q7Z5M5 1100 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 AGBL5Q8NDL9 886 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 OR10G6Q8NH81 332 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 AHCYL2Q96HN2 611 aaKnown RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 TEKT5Q96M29 485 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 ZSCAN5AQ9BUG6 496 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 SEMA4CQ9C0C4 833 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 OR2AG1Q9H205 316 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 SARS2Q9NP81 518 aaKnown RBP17.14■□□□□ 0.33
LITAF-211ENST00000572255 PCDHB11Q9Y5F2 797 aa17.14■□□□□ 0.33
LITAF-211ENST00000572255 SDK2Q58EX2 2172 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 DUX1O43812 170 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 CST8O60676 142 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 PMPCBO75439 489 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 SLC25A14O95258 325 aaPredicted RBP17.13■□□□□ 0.33
LITAF-211ENST00000572255 SLC2A4P14672 509 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 ZNF8P17098 575 aaPredicted RBP17.13■□□□□ 0.33
LITAF-211ENST00000572255 CSTF2P33240 577 aaKnown RBP eCLIP17.13■□□□□ 0.33
LITAF-211ENST00000572255 MAGEA1P43355 309 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 NFATC2Q13469 925 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 MANEAQ5SRI9 462 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 KAZNQ674X7 775 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 PDPK2PQ6A1A2 396 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 CCDC70Q6NSX1 233 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 TMEM71Q6P5X7 295 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 VASH2Q86V25 355 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 DTX1Q86Y01 620 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 TRAM1L1Q8N609 369 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 TC2NQ8N9U0 490 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 TFB1MQ8WVM0 346 aaKnown RBP17.13■□□□□ 0.33
LITAF-211ENST00000572255 GLYATL1Q969I3 302 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 TAAR9Q96RI9 348 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 HERPUD2Q9BSE4 406 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 GOLPH3Q9H4A6 298 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 STN1Q9H668 368 aaKnown RBP17.13■□□□□ 0.33
LITAF-211ENST00000572255 TRIM39Q9HCM9 518 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 UBP1Q9NZI7 540 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 SPO11Q9Y5K1 396 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 ADGRG1Q9Y653 693 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 ALG6Q9Y672 507 aa17.13■□□□□ 0.33
LITAF-211ENST00000572255 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.12■□□□□ 0.33
LITAF-211ENST00000572255 F3P13726 295 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 BPIP17213 487 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 WASHC5Q12768 1159 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 ADGRG6Q86SQ4 1221 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 PHYKPLQ8IUZ5 450 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 PMEPA1Q969W9 287 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 SH3KBP1Q96B97 665 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 SRPK1Q96SB4 655 aaKnown RBP17.12■□□□□ 0.33
LITAF-211ENST00000572255 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 KLC4Q9NSK0 619 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 PCDHGA3Q9Y5H0 932 aa17.12■□□□□ 0.33
LITAF-211ENST00000572255 KIR2DS5A0A0G2JLQ3 304 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 A0A0G2JNG1 304 aa17.11■□□□□ 0.33
LITAF-211ENST00000572255 GPR89AB7ZAQ6 455 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms