RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 LRRC39Q96DD0 335 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 NAF1Q96HR8 494 aaKnown RBP13.71□□□□□ -0.22
RPAIN-209ENST00000571558 KLHL32Q96NJ5 620 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 SMIM14Q96QK8 99 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 PLAC1Q9HBJ0 212 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 SYBUQ9NX95 663 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 ARID1BQ8NFD5 2236 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 TP53BP1Q12888 1972 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 A0A0J9YYE9 177 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 PRAMEF26H0Y7S4 382 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 K7ENP7 123 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 TRIM38O00635 465 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 SLC28A2O43868 658 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 TRBC1P01850 177 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 MPOP05164 745 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 ITGB7P26010 798 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 PTPRRQ15256 657 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 DNAJC21Q5F1R6 531 aaKnown RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 ARMC3Q5W041 872 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 INO80CQ6PI98 192 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 BRAT1Q6PJG6 821 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 TRIM69Q86WT6 500 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 ARRDC3Q96B67 414 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 MCCC1Q96RQ3 725 aaPredicted RBP13.7□□□□□ -0.22
RPAIN-209ENST00000571558 IL22Q9GZX6 179 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 ASCL3Q9NQ33 180 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 PCDHB1Q9Y5F3 818 aa13.7□□□□□ -0.22
RPAIN-209ENST00000571558 C16orf96A6NNT2 1141 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 ANKRD36A6QL64 1941 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 KPNA3O00505 521 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 PRKCGP05129 697 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 ALPPL2P10696 532 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 TIMP2P16035 220 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 ELK3P41970 407 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 MLLT3P42568 568 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 MAGEA4P43358 317 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 TNNT3P45378 269 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 DUSP3P51452 185 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 POU6F1Q14863 301 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 SLMAPQ14BN4 828 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 SETMARQ53H47 684 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 BEND6Q5SZJ8 279 aaPredicted RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 UBAP2Q5T6F2 1119 aaKnown RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 PARS2Q7L3T8 475 aaKnown RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 ZBED8Q8IZ13 594 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 SCRN2Q96FV2 425 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 LYSMD1Q96S90 227 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 EBNA1BP2Q99848 306 aaKnown RBP13.69□□□□□ -0.22
RPAIN-209ENST00000571558 KIFC1Q9BW19 673 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 HDAC8Q9BY41 377 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 ABCG4Q9H172 646 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 EPB41L4BQ9H329 900 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 BFARQ9NZS9 450 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 PHTF1Q9UMS5 762 aa13.69□□□□□ -0.22
RPAIN-209ENST00000571558 PTPN13Q12923 2485 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 NEMP2A6NFY4 417 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 MROH6A6NGR9 719 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 SPINT1O43278 529 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 PLRG1O43660 514 aaKnown RBP13.68□□□□□ -0.22
RPAIN-209ENST00000571558 LDB2O43679 373 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 IL1BP01584 269 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 ALPIP09923 528 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 PIRTP0C851 137 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 DGKAP23743 735 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 ADRA1DP25100 572 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 PSMA3P25788 255 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 DRD3P35462 400 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 PSMD8P48556 350 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 EPHB1P54762 984 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 POLR2LP62875 67 aaKnown RBP13.68□□□□□ -0.22
RPAIN-209ENST00000571558 CDKN3Q16667 212 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 UGP2Q16851 508 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 MAP9Q49MG5 647 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 PCID2Q5JVF3 399 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 HP1BP3Q5SSJ5 553 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-209ENST00000571558 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 TMEM135Q86UB9 458 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 ANKMY2Q8IV38 441 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 TTC30BQ8N4P2 665 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 MREGQ8N565 214 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 BRSK1Q8TDC3 778 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 STAMBPL1Q96FJ0 436 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 KLHDC7BQ96G42 594 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 TRIM56Q9BRZ2 755 aaKnown RBP13.68□□□□□ -0.22
RPAIN-209ENST00000571558 CDC42EP4Q9H3Q1 356 aaKnown RBP13.68□□□□□ -0.22
RPAIN-209ENST00000571558 MAGEE1Q9HCI5 957 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 NINJ2Q9NZG7 142 aa13.68□□□□□ -0.22
RPAIN-209ENST00000571558 SOX13Q9UN79 622 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms