RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RNF14Q9UBS8 474 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 CD84Q9UIB8 345 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
CCDC40-205ENST00000571028 U3KQA8 63 aa13.26□□□□□ -0.29
CCDC40-205ENST00000571028 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 LOC285095A0A1B0GVY8 99 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 PMS2P1A4D2B8 440 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 KIF2AO00139 706 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-205ENST00000571028 PSMD3O43242 534 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 BUD23O43709 281 aaKnown RBP13.25□□□□□ -0.29
CCDC40-205ENST00000571028 RECQL5O94762 991 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-205ENST00000571028 HEXIM1O94992 359 aaKnown RBP13.25□□□□□ -0.29
CCDC40-205ENST00000571028 ECEL1O95672 775 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 PCCBP05166 539 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 TPH1P17752 444 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 FNTAP49354 379 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 GPS1Q13098 491 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 UBAP2LQ14157 1087 aaKnown RBP13.25□□□□□ -0.29
CCDC40-205ENST00000571028 SLC1A5Q15758 541 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 SLC14A2Q15849 920 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 TMEM259Q4ZIN3 620 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 LRRC66Q68CR7 880 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 PPP1R21Q6ZMI0 780 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 Q6ZSR6 202 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 RFLNAQ6ZTI6 216 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 LYSMD3Q7Z3D4 306 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 HSD11B1LQ7Z5J1 315 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 KIF18AQ8NI77 898 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 GRK7Q8WTQ7 553 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-205ENST00000571028 PPP1R2P1Q96PQ5 205 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 KRT12Q99456 494 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 C1QTNF2Q9BXJ5 285 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 GPR63Q9BZJ6 419 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 SPO11Q9Y5K1 396 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 ANKRD36A6QL64 1941 aa13.25□□□□□ -0.29
CCDC40-205ENST00000571028 EFSO43281 561 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 AQP9O43315 295 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 GAS8O95995 478 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 TUBB4AP04350 444 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 APRTP07741 180 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 HLA-DPA1P20036 260 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 ETV3P41162 512 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 IRF4Q15306 451 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 Q6ZVL8 140 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 PARGQ86W56 976 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 SLC22A18ASQ8N1D0 253 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 DNAAF3Q8N9W5 541 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 LMX1AQ8TE12 382 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 NAT6Q93015 286 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 MCCC1Q96RQ3 725 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-205ENST00000571028 C1QTNF7Q9BXJ2 289 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 STRADBQ9C0K7 418 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 LRRC40Q9H9A6 602 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 EPB41L5Q9HCM4 733 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 BPIFA1Q9NP55 256 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 MBNL1Q9NR56 388 aaKnown RBP13.24□□□□□ -0.29
CCDC40-205ENST00000571028 ASIC3Q9UHC3 531 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 FEZ2Q9UHY8 353 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-205ENST00000571028 CDC23Q9UJX2 597 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 PPIL1Q9Y3C6 166 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 ZNF711Q9Y462 761 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 CSNK1G3Q9Y6M4 447 aa13.24□□□□□ -0.29
CCDC40-205ENST00000571028 BOD1L1Q8NFC6 3051 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 CCDC78A2IDD5 438 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 EME2A4GXA9 379 aaPredicted RBP13.23□□□□□ -0.29
CCDC40-205ENST00000571028 CCDC188H7C350 402 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 FPGTO14772 594 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 PLD2O14939 933 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 AURKAO14965 403 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 AP2A1O95782 977 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 EPOP01588 193 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 CSF2P04141 144 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 FGF1P05230 155 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 NME1P15531 152 aaKnown RBP13.23□□□□□ -0.29
CCDC40-205ENST00000571028 SLC5A2P31639 672 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 ADRA1AP35348 466 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 ADCY8P40145 1251 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 DR1Q01658 176 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 PTSQ03393 145 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 CKAP4Q07065 602 aaKnown RBP13.23□□□□□ -0.29
CCDC40-205ENST00000571028 EIF3IQ13347 325 aaKnown RBP13.23□□□□□ -0.29
CCDC40-205ENST00000571028 SEPT6Q14141 434 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 LRRC14Q15048 493 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 WSCD2Q2TBF2 565 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
CCDC40-205ENST00000571028 MANEAQ5SRI9 462 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 ALS2CLQ60I27 953 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 C4orf22Q6V702 233 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 RANBP10Q6VN20 620 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 GCNT7Q6ZNI0 430 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 ABI3BPQ7Z7G0 1075 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 FBXO39Q8N4B4 442 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 SPATA4Q8NEY3 305 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 OR52K1Q8NGK4 314 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 NUS1Q96E22 293 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 TRIM51Q9BSJ1 452 aa13.23□□□□□ -0.29
CCDC40-205ENST00000571028 TRIM31Q9BZY9 425 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms