RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CPNE5Q9HCH3 593 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 RAD18Q9NS91 495 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 PLEKHM1Q9Y4G2 1056 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 OAS3Q9Y6K5 1087 aaKnown RBP12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
CTDNEP1-205ENST00000570828 FASNP49327 2511 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 FADS2P1A8MWK0 482 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 AGRPO00253 132 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 MTSS1O43312 755 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 B4GAT1O43505 415 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PMPCBO75439 489 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZRANB2O95218 330 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 LCA5LO95447 670 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PIRTP0C851 137 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PECAM1P16284 738 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PTPN3P26045 913 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC5A2P31639 672 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PPM1FP49593 454 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 DCDC1P59894 354 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 LLGL1Q15334 1064 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 TAZQ16635 292 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 TEX44Q53QW1 395 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 TFDP3Q5H9I0 405 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 FAM182AQ5T1J6 154 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 ARHGAP40Q5TG30 622 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 ALS2CLQ60I27 953 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 CHST15Q7LFX5 561 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 TMPRSS9Q7Z410 1059 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 KATNAL2Q8IYT4 538 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 SPATA22Q8NHS9 363 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 P3H4Q92791 437 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 TADA1Q96BN2 335 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 TEKT5Q96M29 485 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 WDR24Q96S15 920 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 NUDT22Q9BRQ3 303 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 SPATA16Q9BXB7 569 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 GPR63Q9BZJ6 419 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 SEMA6CQ9H3T2 930 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 STN1Q9H668 368 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 RMI1Q9H9A7 625 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 MAGEE1Q9HCI5 957 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 KCNK4Q9NYG8 393 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 SAE1Q9UBE0 346 aaPredicted RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 CNOT6Q9ULM6 557 aaKnown RBP12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 SHOC2Q9UQ13 582 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZNF711Q9Y462 761 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 PCDHA13Q9Y5I0 950 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 ALG6Q9Y672 507 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 MGAQ8IWI9 3026 aa12.25□□□□□ -0.45
CTDNEP1-205ENST00000570828 DNAJC6O75061 913 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 NDST3O95803 873 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 MT-CYBP00156 380 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 ACP5P13686 325 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 ITIH1P19827 911 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 FASLGP48023 281 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 VAC14Q08AM6 782 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 CLN3Q13286 438 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 USP53Q70EK8 1073 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 DAAM2Q86T65 1068 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 PHYKPLQ8IUZ5 450 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 RCOR2Q8IZ40 523 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 HAUS1Q96CS2 278 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 SRPK1Q96SB4 655 aaKnown RBP12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC38A3Q99624 504 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 ZSCAN5AQ9BUG6 496 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 CARD9Q9H257 536 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 UBP1Q9NZI7 540 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 KLHL8Q9P2G9 620 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 NFKBIL1Q9UBC1 381 aaPredicted RBP12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 FAM153AQ9UHL3 310 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 KCNK6Q9Y257 313 aa12.24□□□□□ -0.45
CTDNEP1-205ENST00000570828 hCG_1818297A0A087WSY0 165 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 IGHV1OR21-1A0A087WYE8 117 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 PRAMEF33A0A0G2JMD5 474 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 GPR89AB7ZAQ6 455 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 HGSO14964 777 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 PPM1DO15297 605 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 NVLO15381 856 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 GRID2O43424 1007 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 NUAK1O60285 661 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 PRAMEF10O60809 474 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC25A14O95258 325 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 GPR89BP0CG08 455 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 SLC2A4P14672 509 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 NFKB1P19838 968 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 CD1CP29017 333 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 MARCKSL1P49006 195 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 MAPK10P53779 464 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 GPLD1P80108 840 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 RHDQ02161 417 aa12.23□□□□□ -0.45
CTDNEP1-205ENST00000570828 WASHC5Q12768 1159 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms