RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ARSDP51689 593 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC12A2P55011 1212 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TAS2R38P59533 333 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPX6P59796 221 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 PTSQ03393 145 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPS2Q13227 327 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 PTPRCAPQ14761 206 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 EFTUD2Q15029 972 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 IRF4Q15306 451 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CHRNA6Q15825 494 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CDKN3Q16667 212 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 KRT71Q3SY84 523 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 KBTBD12Q3ZCT8 623 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMEM31Q5JXX7 168 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 LDLRAP1Q5SW96 308 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 BEND6Q5SZJ8 279 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 HENMT1Q5T8I9 393 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 LGSNQ5TDP6 509 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 LYPLAL1Q5VWZ2 237 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 KIAA0895LQ68EN5 471 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TRMT10BQ6PF06 316 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TSSK4Q6SA08 328 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CERS6Q6ZMG9 384 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 KIAA0408Q6ZU52 694 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CEP68Q76N32 757 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 MARK2Q7KZI7 788 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 LONP2Q86WA8 852 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC26A11Q86WA9 606 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 RBFAQ8N0V3 343 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 RIBC1Q8N443 379 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMEM105Q8N8V8 129 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF398Q8TD17 642 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 HEXDCQ8WVB3 486 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SCG3Q8WXD2 468 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FCRL3Q96P31 734 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 COPS8Q99627 209 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CPNE1Q99829 537 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TSSK1BQ9BXA7 367 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM126AQ9BYI3 521 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC17A9Q9BYT1 436 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TXLNGYQ9BZA5 131 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CLPBQ9H078 707 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 STMN4Q9H169 189 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CENPHQ9H3R5 247 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 C6orf106Q9H6K1 298 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SUDS3Q9H7L9 328 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 CD93Q9NPY3 652 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 AASDHPPTQ9NRN7 309 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 PHPT1Q9NRX4 125 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 INTS10Q9NVR2 710 aaKnown RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SMOXQ9NWM0 555 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 WSB2Q9NYS7 404 aaPredicted RBP6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FBXO5Q9UKT4 447 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 FBXO4Q9UKT5 387 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 DMTF1Q9Y222 760 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 SHROOM3Q8TF72 1996 aa6.54□□□□□ -1.36
CTDNEP1-204ENST00000570484 TCF20Q9UGU0 1960 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 MIA3Q5JRA6 1907 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 PRUNE2Q8WUY3 3088 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 IQANK1A0A1B0GTG1 560 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 TLDC2A0PJX2 215 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM86C2PA6NEL3 165 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 A6NNZ2 444 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 E5RI56 91 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 PRAMEF26H0Y7S4 382 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CACNB4O00305 520 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 QSOX1O00391 747 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 RASGRF2O14827 1237 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 INPP4BO15327 924 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC31A1O15431 190 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 GPR39O43194 453 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CDH16O75309 829 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC25A14O95258 325 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF7P17097 686 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 KRT15P19012 456 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 KELP23276 732 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ACRV1P26436 265 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CNTFP26441 200 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ARNTP27540 789 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 HTR1BP28222 390 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 HOXA6P31267 233 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPRP35270 261 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 GP5P40197 560 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLCO1A2P46721 670 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ARCN1P48444 511 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 FNTBP49356 437 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 THOP1P52888 689 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CSE1LP55060 971 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 DPTQ07507 201 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 MSLNQ13421 630 aaPredicted RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 PEX6Q13608 980 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ITIH4Q14624 930 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMED2Q15363 201 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 TYSND1Q2T9J0 566 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 HSP90B2PQ58FF3 399 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 WDR45BQ5MNZ6 344 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 CEP85LQ5SZL2 805 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 PSAPL1Q6NUJ1 521 aa6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZC3H14Q6PJT7 736 aaKnown RBP6.53□□□□□ -1.36
CTDNEP1-204ENST00000570484 DOK6Q6PKX4 331 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms