RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PRPSAP1Q14558 356 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 KIF26BQ2KJY2 2108 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 RANBP10Q6VN20 620 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-220ENST00000569916 SPRED1Q7Z699 444 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 ADGRG6Q86SQ4 1221 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 PHYKPLQ8IUZ5 450 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 CCNJLQ8IV13 435 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 ARL14Q8N4G2 192 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 FAM71DQ8N9W8 422 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 UBE2Q2Q8WVN8 375 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 VPS35Q96QK1 796 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 APOL2Q9BQE5 337 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 TMEM121Q9BTD3 319 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 CARD9Q9H257 536 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 LRRN3Q9H3W5 708 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 ZNHIT2Q9UHR6 403 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 RAXQ9Y2V3 346 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 AAR2Q9Y312 384 aaKnown RBP12.9□□□□□ -0.34
CNOT1-220ENST00000569916 AK5Q9Y6K8 562 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 KNTC1P50748 2209 aa12.9□□□□□ -0.34
CNOT1-220ENST00000569916 A0A1W2PNU3 283 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 GPR89AB7ZAQ6 455 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 D6RAR5 112 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 GAPDHSO14556 408 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 CHUKO15111 745 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 GRID2O43424 1007 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 BRINP1O60477 761 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 MTX2O75431 263 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 GPR89BP0CG08 455 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 SPAM1P38567 509 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 MSLNQ13421 630 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 NR1D2Q14995 579 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 RPS6KA1Q15418 735 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 ATP13A5Q4VNC0 1218 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 KHDC1Q4VXA5 237 aaKnown RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF438Q7Z4V0 828 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 SLC13A5Q86YT5 568 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 Q8N9G6 341 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 DTX3LQ8TDB6 740 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 GRAMD1AQ96CP6 724 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 ATXN7L3BQ96GX2 97 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 PPP1R2P1Q96PQ5 205 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 ALS2CR12Q96Q35 445 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 GFM1Q96RP9 751 aaKnown RBP12.89□□□□□ -0.35
CNOT1-220ENST00000569916 TBL1YQ9BQ87 522 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 OR2AG1Q9H205 316 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 TRIM39Q9HCM9 518 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 IL26Q9NPH9 171 aa12.89□□□□□ -0.35
CNOT1-220ENST00000569916 APC2O95996 2303 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 GPR39O43194 453 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 TLX3O43711 291 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-220ENST00000569916 LIASO43766 372 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 METTL18O95568 372 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 EML2O95834 649 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 MPOP05164 745 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ACP5P13686 325 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 CA5AP35218 305 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 GABREP78334 506 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 B4GALNT1Q00973 533 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 PTPRCAPQ14761 206 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 TAF1AQ15573 450 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-220ENST00000569916 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
CNOT1-220ENST00000569916 PARP6Q2NL67 630 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 C3orf38Q5JPI3 329 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ZDHHC20Q5W0Z9 365 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 KCTD11Q693B1 232 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 DENND5AQ6IQ26 1287 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 FAM151BQ6UXP7 276 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 B3GNT8Q7Z7M8 397 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 RTP4Q96DX8 246 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 POLR1BQ9H9Y6 1135 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ARNT2Q9HBZ2 717 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 TBC1D29Q9UFV1 150 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ATXN7L1Q9ULK2 861 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-220ENST00000569916 KCNK6Q9Y257 313 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 PKP3Q9Y446 797 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ARL5AQ9Y689 179 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ADAMTS20P59510 1910 aa12.88□□□□□ -0.35
CNOT1-220ENST00000569916 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-220ENST00000569916 UNC13CQ8NB66 2214 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 GLYATL1P3A0A0U1RQE8 302 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 PMS2P1A4D2B8 440 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 A6NCN8 305 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 PPM1DO15297 605 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 STX7O15400 261 aaKnown RBP12.87□□□□□ -0.35
CNOT1-220ENST00000569916 NRDCO43847 1150 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 VEGFDO43915 354 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 PPFIA2O75334 1257 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 DXOO77932 396 aaKnown RBP12.87□□□□□ -0.35
CNOT1-220ENST00000569916 FASLGP48023 281 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 LSSP48449 732 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 SIX1Q15475 284 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms