RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DUOXA1Q1HG43 343 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 ANKRD20A4Q4UJ75 823 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 TRIM61Q5EBN2 209 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 SPANXN3Q5MJ09 141 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 LYPLAL1Q5VWZ2 237 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 AFTPHQ6ULP2 937 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 ZDHHC24Q6UX98 284 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 SDCCAG8Q86SQ7 713 aaPredicted RBP15.92■□□□□ 0.14
USB1-215ENST00000569252 IQCHQ86VS3 1027 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 ANKMY2Q8IV38 441 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 EIF1ADQ8N9N8 165 aaKnown RBP15.92■□□□□ 0.14
USB1-215ENST00000569252 FBXO36Q8NEA4 188 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 OR4L1Q8NH43 312 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.92■□□□□ 0.14
USB1-215ENST00000569252 ZCCHC14Q8WYQ9 949 aaKnown RBP15.92■□□□□ 0.14
USB1-215ENST00000569252 ULK4Q96C45 1275 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 CFAP36Q96G28 342 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 HIC2Q96JB3 615 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 TBATAQ96M53 351 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 KLF6Q99612 283 aaPredicted RBP15.92■□□□□ 0.14
USB1-215ENST00000569252 APOOQ9BUR5 198 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 WDR26Q9H7D7 661 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 PPANQ9NQ55 473 aaKnown RBP15.92■□□□□ 0.14
USB1-215ENST00000569252 NFKBIL1Q9UBC1 381 aaPredicted RBP15.92■□□□□ 0.14
USB1-215ENST00000569252 NFU1Q9UMS0 254 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 CHMP2BQ9UQN3 213 aa15.92■□□□□ 0.14
USB1-215ENST00000569252 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 H7C0S8 307 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 TLR4O00206 839 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 ASMTLO95671 621 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 CFIP05156 583 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 THEGLP0DJG4 465 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 RALBP11234 206 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 GM2AP17900 193 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 TEAD1P28347 426 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 MAGEA4P43358 317 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 CACNG1Q06432 222 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 ERCC6LQ2NKX8 1250 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 GPR33Q49SQ1 333 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 MSS51Q4VC12 460 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 AARS2Q5JTZ9 985 aaKnown RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 HENMT1Q5T8I9 393 aaKnown RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 MRNIPQ6NTE8 343 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 CES3Q6UWW8 571 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 ADAMTSL4Q6UY14 1074 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 KYAT3Q6YP21 454 aaKnown RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 SNX20Q7Z614 316 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 TMEM135Q86UB9 458 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 KDF1Q8NAX2 398 aaPredicted RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 TMEM145Q8NBT3 493 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
USB1-215ENST00000569252 PLA2G15Q8NCC3 412 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 MFSD3Q96ES6 412 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 DCUN1D1Q96GG9 259 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 BMFQ96LC9 184 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 NUSAP1Q9BXS6 441 aaKnown RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 SUDS3Q9H7L9 328 aaPredicted RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 ZDHHC18Q9NUE0 388 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 SLC2A6Q9UGQ3 507 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.91■□□□□ 0.14
USB1-215ENST00000569252 TEX264Q9Y6I9 313 aa15.91■□□□□ 0.14
USB1-215ENST00000569252 V9GYY5 206 aaPredicted RBP15.91■□□□□ 0.14
USB1-215ENST00000569252 PLXND1Q9Y4D7 1925 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 CCDC162PA2VCL2 907 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 POM121BA6NF01 834 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 C10orf142B7Z368 130 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 BHMG1C9JSJ3 638 aaPredicted RBP15.9■□□□□ 0.14
USB1-215ENST00000569252 E7ESA3 106 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 CCL22O00626 93 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 INPP4BO15327 924 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 TP73O15350 636 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 VAPBO95292 243 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 SYPP08247 313 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 HOXC4P09017 264 aaPredicted RBP15.9■□□□□ 0.14
USB1-215ENST00000569252 ENGP17813 658 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 IGFALSP35858 605 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 TRIM23P36406 574 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 CSNK1EP49674 416 aaKnown RBP15.9■□□□□ 0.14
USB1-215ENST00000569252 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 LONRF1Q17RB8 773 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 ATP13A5Q4VNC0 1218 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 LDLRAP1Q5SW96 308 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 CERS6Q6ZMG9 384 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 ABI3BPQ7Z7G0 1075 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 HEATR4Q86WZ0 1026 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 PHYKPLQ8IUZ5 450 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 OR13J1Q8NGT2 312 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 CALML6Q8TD86 181 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 HEXDCQ8WVB3 486 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 BTN2A2Q8WVV5 523 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 ZNF778Q96MU6 729 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 ZCCHC2Q9C0B9 1178 aaKnown RBP15.9■□□□□ 0.14
USB1-215ENST00000569252 TREX1Q9NSU2 369 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 CATSPERZQ9NTU4 200 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 C20orf96Q9NUD7 363 aaPredicted RBP15.9■□□□□ 0.14
USB1-215ENST00000569252 CA5BQ9Y2D0 317 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 OR1A2Q9Y585 309 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 FAM169AQ9Y6X4 670 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 TRPM6Q9BX84 2022 aa15.9■□□□□ 0.14
USB1-215ENST00000569252 SMG1Q96Q15 3661 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms