RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 GNPDA1P46926 289 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 LSSP48449 732 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 GDF10P55107 478 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CCL7P80098 99 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 TAF1AQ15573 450 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CCNG2Q16589 344 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 P3H1Q32P28 736 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC181Q5TID7 509 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 IYDQ6PHW0 289 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 WASH2PQ6VEQ5 465 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 KDELC2Q7Z4H8 507 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 SPRED1Q7Z699 444 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 C11orf96Q7Z7L8 435 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 TRIM74Q86UV6 250 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 ZNF547Q8IVP9 402 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 SFTPA2Q8IWL1 248 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 SFRP1Q8N474 314 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 ARL14Q8N4G2 192 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 IPMKQ8NFU5 416 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 TRIM58Q8NG06 486 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 ZDHHC1Q8WTX9 485 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 ZCCHC14Q8WYQ9 949 aaKnown RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC74AQ96AQ1 378 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 NXPE2Q96DL1 559 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 LIN37Q96GY3 246 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 FAM118BQ9BPY3 351 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 ABCG4Q9H172 646 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 LRRN3Q9H3W5 708 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 WASH6PQ9NQA3 447 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 PDP2Q9P2J9 529 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 SSUH2Q9Y2M2 353 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 PCDHGA8Q9Y5G5 932 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 DNMT3AQ9Y6K1 912 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 RNF215Q9Y6U7 377 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CFAP47Q6ZTR5 3102 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 OR5K4A6NMS3 321 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 TMX2-CTNND1H3BSU7 103 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 H7C0S8 307 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PPM1DO15297 605 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 INPP4BO15327 924 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 GRID2O43424 1007 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 LDB2O43679 373 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 CSO75390 466 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 SUN1O94901 812 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 SLC25A14O95258 325 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 METTL18O95568 372 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 ECEL1O95672 775 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 ATP1A1P05023 1023 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 LPOP22079 712 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 CA5AP35218 305 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 ERVPABLB-1P60509 514 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 XIAPP98170 497 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PDE1BQ01064 536 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 CYP4F3Q08477 520 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 DMPKQ09013 629 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PRPSAP1Q14558 356 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 RPS6KA1Q15418 735 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 ATP13A5Q4VNC0 1218 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 KHDC1Q4VXA5 237 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC157Q569K6 752 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 ZNF569Q5MCW4 686 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 RBM44Q6ZP01 1051 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 GLT6D1Q7Z4J2 308 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 GALNT13Q8IUC8 556 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 LSMEM2Q8N112 164 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 FAM71DQ8N9W8 422 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 DDHD1Q8NEL9 900 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 SNIP1Q8TAD8 396 aaKnown RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 MDM1Q8TC05 714 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PDLIM2Q96JY6 352 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 SLC46A1Q96NT5 459 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 TBL1YQ9BQ87 522 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 TIMM29Q9BSF4 260 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 TMEM121Q9BTD3 319 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 FICDQ9BVA6 458 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 SPATA16Q9BXB7 569 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 FSD1LQ9BXM9 530 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 B3GNT4Q9C0J1 378 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 DPEP2Q9H4A9 486 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 UCK1Q9HA47 277 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 SIRPGQ9P1W8 387 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 LRIT1Q9P2V4 623 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 GULP1Q9UBP9 304 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 RIMKLBQ9ULI2 386 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 TTC7AQ9ULT0 858 aaPredicted RBP8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PPP2R2CQ9Y2T4 447 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 GPSM3Q9Y4H4 160 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PTPRQQ9UMZ3 2332 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 PKD1L2Q7Z442 2459 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 AHCTF1Q8WYP5 2266 aa8.09□□□□□ -1.11
HDGFL3-205ENST00000568129 DSPP15924 2871 aaKnown RBP8.08□□□□□ -1.12
HDGFL3-205ENST00000568129 TRBV5-4A0A0C4DH59 114 aa8.08□□□□□ -1.12
HDGFL3-205ENST00000568129 GOLGA6CA6NDK9 693 aa8.08□□□□□ -1.12
HDGFL3-205ENST00000568129 GOLGA6BA6NDN3 693 aa8.08□□□□□ -1.12
HDGFL3-205ENST00000568129 MROH6A6NGR9 719 aa8.08□□□□□ -1.12
HDGFL3-205ENST00000568129 C2orf81A6NN90 581 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms