RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 GK5Q6ZS86 529 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 FAM129CQ86XR2 697 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 SLC9A9Q8IVB4 645 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ZNF483Q8TF39 744 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 PLGRKTQ9HBL7 147 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 SLCO1B3Q9NPD5 702 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 PNPLA3Q9NST1 481 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TBC1D14Q9P2M4 693 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 CKLFQ9UBR5 152 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TRPS1Q9UHF7 1281 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 MAGEL2Q9UJ55 1249 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 DHX15O43143 795 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TCF4P15884 667 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 MSX2P35548 267 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 RHBDL3P58872 404 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 MTX3Q5HYI7 312 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 LINGO4Q6UY18 593 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 NDRG1Q92597 394 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TP53INP1Q96A56 240 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 SAMD4AQ9UPU9 718 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TMA7Q9Y2S6 64 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 PKMP14618 531 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ACADLP28330 430 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 FOLH1Q04609 750 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 C2orf80Q0P641 193 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 RFWD3Q6PCD5 774 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ZNF433Q8N7K0 673 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 EXOSC8Q96B26 276 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 OSBPL11Q9BXB4 747 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 RHOJQ9H4E5 214 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 LRTM1Q9HBL6 345 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 S100A9P06702 114 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 SLURP2P0DP57 97 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ITGB5P18084 799 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 GNPDA1P46926 289 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 RNF31Q96EP0 1072 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 CCNB1IP1Q9NPC3 277 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 FSBPO95073 299 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 LAMP2P13473 410 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 MPSTP25325 297 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 BCAP31P51572 246 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 CASP9P55211 416 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ELP6Q0PNE2 266 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ATP13A5Q4VNC0 1218 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 GALNT13Q8IUC8 556 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TCAIMQ8N3R3 496 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ADCY4Q8NFM4 1077 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 PPTC7Q8NI37 304 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TRPM4Q8TD43 1214 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 TSEN15Q8WW01 171 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 JSRP1Q96MG2 331 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 ACSS2Q9NR19 701 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 NKIRAS2Q9NYR9 191 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 COLEC10Q9Y6Z7 277 aa13.54□□□□□ -0.24
CX3CL1-204ENST00000565912 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 NAE1Q13564 534 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 PARP15Q460N3 678 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 DUPD1Q68J44 220 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 ATG10Q9H0Y0 220 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SLC17A7Q9P2U7 560 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 MAP4K5Q9Y4K4 846 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 PCDHGA3Q9Y5H0 932 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 CLUHO75153 1309 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 ARHGEF33A8MVX0 844 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 KLRC4O43908 158 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 NFATC1O95644 943 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 FADS2O95864 444 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 KCNA5P22460 613 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SPAM1P38567 509 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 LARS2Q15031 903 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 RBM44Q6ZP01 1051 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SPATA19Q7Z5L4 167 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 TMC8Q8IU68 726 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 PMM1Q92871 262 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 PMEPA1Q969W9 287 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SMIM35A0A1B0GVV1 85 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 FPGTO14772 594 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 FSCN2O14926 492 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 ALOX15BO15296 676 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 CDH3P22223 829 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 ADRA1BP35368 520 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SEC13P55735 322 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 IL18R1Q13478 541 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 SNAPC1Q16533 368 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 RALGPS2Q86X27 583 aaPredicted RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 NDRG2Q9UN36 371 aaKnown RBP13.53□□□□□ -0.24
CX3CL1-204ENST00000565912 DERAQ9Y315 318 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms