RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PASD1Q8IV76 773 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 ZNF295-AS1Q8N0V1 137 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 ADAMTS17Q8TE56 1095 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 PTCD2Q8WV60 388 aaKnown RBP8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 SHC3Q92529 594 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 MR1Q95460 341 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 ZDHHC12Q96GR4 267 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 AGAP3Q96P47 875 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 ERGIC2Q96RQ1 377 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 HERPUD2Q9BSE4 406 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 VPS16Q9H269 839 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 HSD3B7Q9H2F3 369 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 UCK1Q9HA47 277 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 ACP6Q9NPH0 428 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 PLCB1Q9NQ66 1216 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 CPNE7Q9UBL6 633 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 LHX3Q9UBR4 397 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 SUCOQ9UBS9 1254 aaKnown RBP8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 PCDHGC3Q9UN70 934 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 SNX7Q9UNH6 387 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 NTNG1Q9Y2I2 539 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
VPS9D1-205ENST00000565452 CHD5Q8TDI0 1954 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 LILRA5A6NI73 299 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 SNX2O60749 519 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 ASMTLO95671 621 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 EML2O95834 649 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 SERPINC1P01008 464 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 IGHEP01854 428 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 RAB40ALP0C0E4 278 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 NELFEP18615 380 aaKnown RBP8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 PON1P27169 355 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 GFERP55789 205 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 UBXN1Q04323 297 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 PTK2Q05397 1052 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 LAMB3Q13751 1172 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 NR1I3Q14994 352 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 LLGL1Q15334 1064 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 HSP90AA4PQ58FG1 418 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 DENND2CQ68D51 928 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 MTFR2Q6P444 385 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 TRIM65Q6PJ69 517 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 Q6ZS92 163 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 MARK2Q7KZI7 788 aaKnown RBP8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 MRGPRGQ86SM5 289 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 PHLDB2Q86SQ0 1253 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 LUZP1Q86V48 1076 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 SIDT2Q8NBJ9 832 aaKnown RBP8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 FAR1Q8WVX9 515 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 ECHDC3Q96DC8 303 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 C18orf8Q96DM3 657 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 TBC1D31Q96DN5 1066 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 IQCDQ96DY2 449 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 WASH6PQ9NQA3 447 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 UBA2Q9UBT2 640 aaPredicted RBP8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 APEX2Q9UBZ4 518 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 TBC1D29Q9UFV1 150 aa8.93□□□□□ -0.98
VPS9D1-205ENST00000565452 PKDREJQ9NTG1 2253 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 A0A1B0GTH6 734 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 A0A1W2PQ67 120 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FAM221AA4D161 298 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 LGALS16A8MUM7 142 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FAM72CH0Y354 149 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 CBFA2T2O43439 604 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 LRIG2O94898 1065 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 TIAF1O95411 115 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 XRCC1P18887 633 aaPredicted RBP8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 SCNN1AP37088 669 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 ETV3P41162 512 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 UBASH3AP57075 661 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 GSDMDP57764 484 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FANCCQ00597 558 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 ACY1Q03154 408 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 DPTQ07507 201 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 NSUN2Q08J23 767 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 TUBB3Q13509 450 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 MYBPC3Q14896 1274 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 PARP15Q460N3 678 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 PTPN20Q4JDL3 420 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FAM72AQ5TYM5 149 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 MANEALQ5VSG8 457 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FAM72DQ6L9T8 149 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 ADAMTSL4Q6UY14 1074 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 CHST15Q7LFX5 561 aaPredicted RBP8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 APTXQ7Z2E3 356 aaKnown RBP8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 PRSS42Q7Z5A4 293 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 CUZD1Q86UP6 607 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FAM72BQ86X60 149 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 ZNF808Q8N4W9 903 aaPredicted RBP8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 GRHL3Q8TE85 626 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 COG1Q8WTW3 980 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 ITLN2Q8WWU7 325 aaPredicted RBP8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 DTD2Q96FN9 168 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 FER1L6-AS2Q96M78 137 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 IP6K3Q96PC2 410 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 NLNQ9BYT8 704 aa8.92□□□□□ -0.98
VPS9D1-205ENST00000565452 KLC2Q9H0B6 622 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms