RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MTHFRP42898 656 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ARHGAP1Q07960 439 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 KCNJ8Q15842 424 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 IQSEC1Q6DN90 963 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SPESP1Q6UW49 350 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 BDH2Q9BUT1 245 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NFKBIZQ9BYH8 718 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MARCH7Q9H992 704 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GIN1Q9NXP7 522 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MTRRQ9UBK8 725 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PGFP49763 221 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SEPHS1P49903 392 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 HERVK_113P63132 956 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 UGT3A1Q6NUS8 523 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 BLOC1S3Q6QNY0 202 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC22A9Q8IVM8 553 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CNIH3Q8TBE1 160 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 BLOC1S5Q8TDH9 187 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 FRS2Q8WU20 508 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TMEM40Q8WWA1 233 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ELMO1Q92556 727 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ERVK-6Q9BXR3 956 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PARP14Q460N5 1801 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MAFKO60675 156 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SEC14L2O76054 403 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NADKO95544 446 aaPredicted RBP20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 HTR1AP08908 422 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 THRBP10828 461 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ITGB6P18564 788 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PAX3P23760 479 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MAP2K4P45985 399 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DPY19L1Q2PZI1 675 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CTU2Q2VPK5 515 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GALNT5Q7Z7M9 940 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RBM23Q86U06 439 aaKnown RBP20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TBC1D21Q8IYX1 336 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RAB2BQ8WUD1 216 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 UBXN10Q96LJ8 280 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 VAT1Q99536 393 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF408Q9H9D4 720 aa20.37■□□□□ 0.85
MAP1LC3B-206ENST00000564844 USP2O75604 605 aaPredicted RBP20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CAPN15O75808 1086 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GPIP06744 558 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CRHBPP24387 322 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TMBIM6P55061 237 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DSC2Q02487 901 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SF3B4Q15427 424 aaKnown RBP eCLIP20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 INAQ16352 499 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MARCH8Q5T0T0 291 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ENPP6Q6UWR7 440 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NANOGNBQ7Z5D8 188 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 THAP5Q7Z6K1 395 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RHNO1Q9BSD3 238 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 INTS10Q9NVR2 710 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RGS17Q9UGC6 210 aaPredicted RBP20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 E2F6O75461 281 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC26A2P50443 739 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 HACD2Q6Y1H2 254 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ARHGAP12Q8IWW6 846 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 C8orf59Q8N0T1 100 aaPredicted RBP20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 LGI2Q8N0V4 545 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 OR13J1Q8NGT2 312 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CARS2Q9HA77 564 aaKnown RBP20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC30A1Q9Y6M5 507 aa20.36■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TRIM64A6NGJ6 449 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 HS6ST1O60243 411 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ABCB7O75027 752 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 IL12AP29459 219 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CILP2Q8IUL8 1156 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DTWD1Q8N5C7 304 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PSMA8Q8TAA3 256 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 WDR70Q9NW82 654 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 J3KR12 359 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 M0R3G1 203 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SCNN1AP37088 669 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GJA8P48165 433 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RPL34P49207 117 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZCCHC7Q8N3Z6 543 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 FNDC5Q8NAU1 212 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ITFG1Q8TB96 612 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 FCRL5Q96RD9 977 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ABCB10Q9NRK6 738 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ARL5AQ9Y689 179 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CYBBP04839 570 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PABPC1P11940 636 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TCEA1P23193 301 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GEMP55040 296 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF280AP59817 542 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 IHHQ14623 411 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GTF2IRD2BQ6EKJ0 949 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 KIAA0930Q6ICG6 404 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 RANBP10Q6VN20 620 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 USP51Q70EK9 711 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GTF2IRD2Q86UP8 949 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC22A16Q86VW1 577 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PHYKPLQ8IUZ5 450 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CDYL2Q8N8U2 506 aa20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NOL6Q9H6R4 1146 aaKnown RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SDR39U1Q9NRG7 319 aaPredicted RBP20.35■□□□□ 0.85
MAP1LC3B-206ENST00000564844 POLR3BQ9NW08 1133 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms