RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ECEL1O95672 775 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 RPLP0P05388 317 aaKnown RBP18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 MAZP56270 477 aaKnown RBP18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 KLF1Q13351 362 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 ARHGEF18Q6ZSZ5 1173 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 PHYKPLQ8IUZ5 450 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 OR2AG1Q9H205 316 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 ENTPD2Q9Y5L3 495 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 ST14Q9Y5Y6 855 aa18.17■□□□□ 0.5
SYNGR3-204ENST00000564642 COL27A1Q8IZC6 1860 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 C5orf60A6NFR6 353 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 CASC3O15234 703 aaKnown RBP18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 NUAK1O60285 661 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 SPAM1P38567 509 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 RPS6KA1Q15418 735 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 ZNF648Q5T619 568 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 RANBP10Q6VN20 620 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 ZNF662Q6ZS27 426 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 C17orf82Q86X59 251 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 NAGSQ8N159 534 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 ARL14Q8N4G2 192 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 TTC30BQ8N4P2 665 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 FAM71DQ8N9W8 422 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 ATXN7L3BQ96GX2 97 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 GORASP1Q9BQQ3 440 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 IL17CQ9P0M4 197 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 R3HDM2Q9Y2K5 976 aaKnown RBP18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 RAXQ9Y2V3 346 aa18.16■□□□□ 0.5
SYNGR3-204ENST00000564642 FLNBO75369 2602 aaKnown RBP18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 A0A1W2PQM1 296 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 TCRBV7S2A1N4TA0A589 114 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 GPR89AB7ZAQ6 455 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 STX7O15400 261 aaKnown RBP18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 BUD23O43709 281 aaKnown RBP18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 BRINP1O60477 761 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 PPFIA2O75334 1257 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 ZIC2O95409 532 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 MPOP05164 745 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 GPR89BP0CG08 455 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 ACP5P13686 325 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 ZNF8P17098 575 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 ACTN2P35609 894 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 GABREP78334 506 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 PARP6Q2NL67 630 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 MEI1Q5TIA1 1274 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 SPRED1Q7Z699 444 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 ADGRG6Q86SQ4 1221 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 LSMEM2Q8N112 164 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 GDAP1Q8TB36 358 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 SLC35B2Q8TB61 432 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 PATE1Q8WXA2 126 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 VPS35Q96QK1 796 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 APOL2Q9BQE5 337 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 TMEM121Q9BTD3 319 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 POLR1BQ9H9Y6 1135 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 GRPEL1Q9HAV7 217 aa18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 PCYT1BQ9Y5K3 369 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-204ENST00000564642 TRBV23OR9-2A0A075B6M9 112 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 C2orf81A6NN90 581 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 TMX2-CTNND1H3BSU7 103 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 VEGFDO43915 354 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 CDK14O94921 469 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 LPOP22079 712 aaPredicted RBP18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 ALDH4A1P30038 563 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 ADRA1AP35348 466 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 LSSP48449 732 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 CCZ1BP86790 482 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 CCZ1P86791 482 aaPredicted RBP18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 TAF1AQ15573 450 aaPredicted RBP18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 ATP13A5Q4VNC0 1218 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 C3orf38Q5JPI3 329 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 FAM151BQ6UXP7 276 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 DTX3LQ8TDB6 740 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 BRSK1Q8TDC3 778 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 TTC25Q96NG3 672 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 TMEM74Q96NL1 305 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 TBL1YQ9BQ87 522 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 IL26Q9NPH9 171 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 SATB2Q9UPW6 733 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 KCNK6Q9Y257 313 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 UNC13CQ8NB66 2214 aa18.14■□□□□ 0.49
SYNGR3-204ENST00000564642 GLYATL1P3A0A0U1RQE8 302 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 D6RAR5 112 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 KMOO15229 486 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 SNX2O60749 519 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 MTX2O75431 263 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 STIP1P31948 543 aaKnown RBP18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 INHBCP55103 352 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 OLIG2Q13516 323 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 ITGA9Q13797 1035 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 GTF2H3Q13889 308 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 SPARCL1Q14515 664 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 CHRNA6Q15825 494 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 P3H1Q32P28 736 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 FOXR1Q6PIV2 292 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 CRTC3Q6UUV7 619 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 SLC13A5Q86YT5 568 aaPredicted RBP18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 DCBLD2Q96PD2 775 aa18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 FRMD8P1Q9BZ68 369 aaPredicted RBP18.13■□□□□ 0.49
SYNGR3-204ENST00000564642 STRADBQ9C0K7 418 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms