RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 OSGEPL1Q9H4B0 414 aa7.24□□□□□ -1.25
VPS4A-203ENST00000564399 PDE7BQ9NP56 450 aa7.24□□□□□ -1.25
VPS4A-203ENST00000564399 GPATCH2LQ9NWQ4 482 aa7.24□□□□□ -1.25
VPS4A-203ENST00000564399 ADAM22Q9P0K1 906 aa7.24□□□□□ -1.25
VPS4A-203ENST00000564399 KIAA1468Q9P260 1216 aa7.24□□□□□ -1.25
VPS4A-203ENST00000564399 RWDD2AQ9UIY3 292 aa7.24□□□□□ -1.25
VPS4A-203ENST00000564399 ANKRD12Q6UB98 2062 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 GOLGA6L3A6NEY3 463 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ZNF185O15231 689 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 TOX3O15405 576 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 DNAJC6O75061 913 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 GFPT2O94808 682 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 UBXN7O94888 489 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 CBX6O95503 412 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 SOD1P00441 154 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 VIPP01282 170 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 CYP1A1P04798 512 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 PRF1P14222 555 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 PRKCSHP14314 528 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 DESP17661 470 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 HTR7P34969 479 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 PTGIRP43119 386 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 NSFP46459 744 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ZNF143P52747 638 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 AIF1P55008 147 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 CDK18Q07002 472 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 SLC10A7Q0GE19 358 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 TRAF2Q12933 501 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 IL10RAQ13651 578 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 MAN2A1Q16706 1144 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ARMC12Q5T9G4 340 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 KLHDC7AQ5VTJ3 777 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 LRRC66Q68CR7 880 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 IRGCQ6NXR0 463 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 FAM92BQ6ZTR7 304 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 TMEM26Q6ZUK4 368 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ZC3H18Q86VM9 953 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ZNF677Q86XU0 584 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 HPS6Q86YV9 775 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 PHYKPLQ8IUZ5 450 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 IQCKQ8N0W5 287 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 NDUFAF2Q8N183 169 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 BBS5Q8N3I7 341 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 CISD2Q8N5K1 135 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 RBMXL3Q8N7X1 1067 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 SPOCK2Q92563 424 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 SNRNP40Q96DI7 357 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 AGAP2Q99490 1192 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 RIOK2Q9BVS4 552 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 BRD8Q9H0E9 1235 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 NDST4Q9H3R1 872 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 DHX35Q9H5Z1 703 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 AKIRIN1Q9H9L7 192 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 NOD2Q9HC29 1040 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 ASF1BQ9NVP2 202 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 OGFRQ9NZT2 677 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 VPS18Q9P253 973 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 RARRES3Q9UL19 164 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 FARSAQ9Y285 508 aaKnown RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 PCYT1BQ9Y5K3 369 aaPredicted RBP7.23□□□□□ -1.25
VPS4A-203ENST00000564399 OTOGQ6ZRI0 2925 aa7.23□□□□□ -1.25
VPS4A-203ENST00000564399 HIVEP1P15822 2718 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 SIGLEC16A6NMB1 481 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 F5H423 210 aaPredicted RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 F8VZ95 297 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 PGLSO95336 258 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 TIAF1O95411 115 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 CALB1P05937 261 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 UCHL3P15374 230 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 ERCC2P18074 760 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 HSPA9P38646 679 aaKnown RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 ARL4DP49703 201 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 EPHB1P54762 984 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 ITGA1P56199 1179 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 MAXP61244 160 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 UBE2IP63279 158 aaKnown RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 FMO1Q01740 532 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 CDR2Q01850 454 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 TUBB3Q13509 450 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 RAPSNQ13702 412 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 PLEKHN1Q494U1 663 aaPredicted RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 VWA3BQ502W6 1294 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 PPP6R3Q5H9R7 873 aaPredicted RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 SP5Q6BEB4 398 aaPredicted RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 PWWP2BQ6NUJ5 590 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 DPY19L2P1Q6NXN4 242 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 DNAJC24Q6P3W2 148 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 DCUN1D2Q6PH85 259 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 TRIM72Q6ZMU5 477 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 ZNF765Q7L2R6 523 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 PRSS42Q7Z5A4 293 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 ARHGAP12Q8IWW6 846 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 SIDT2Q8NBJ9 832 aaKnown RBP7.22□□□□□ -1.25
VPS4A-203ENST00000564399 C3orf20Q8ND61 904 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 FDCSPQ8NFU4 85 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 NSMCE1Q8WV22 266 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 RSC1A1Q92681 617 aa7.22□□□□□ -1.25
VPS4A-203ENST00000564399 MR1Q95460 341 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms