RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ZNF624Q9P2J8 865 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 NUP210LQ5VU65 1888 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 GOLGA6CA6NDK9 693 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 GOLGA6BA6NDN3 693 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 DFFAO00273 331 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 ZW10O43264 779 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 MAFKO60675 156 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 KATNA1O75449 491 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 PRLP01236 227 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 GOLGA6DP0CG33 693 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 ACP5P13686 325 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 F3P13726 295 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 BRAFP15056 766 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 TCF4P15884 667 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 HTR7P34969 479 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SLC19A1P41440 591 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 PTGIRP43119 386 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SEPHS1P49903 392 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 AIF1P55008 147 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 POLR2LP62875 67 aaKnown RBP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 CRB2Q5IJ48 1285 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 LCN10Q6JVE6 187 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 ZNF517Q6ZMY9 492 aaPredicted RBP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 LYSMD3Q7Z3D4 306 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 NLRP8Q86W28 1048 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 CREBRFQ8IUR6 639 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SRRM1Q8IYB3 904 aaKnown RBP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 EFCAB3Q8N7B9 438 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 AP2M1Q96CW1 435 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 EID2BQ96D98 161 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SELENOOQ9BVL4 669 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 RIOK2Q9BVS4 552 aaKnown RBP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 NUDT9Q9BW91 350 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 UCK1Q9HA47 277 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SP110Q9HB58 689 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 GOLGA6AQ9NYA3 693 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 DONSONQ9NYP3 566 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 TAS2R14Q9NYV8 317 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 VPS18Q9P253 973 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 CPNE7Q9UBL6 633 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SLC23A2Q9UGH3 650 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 HOOK1Q9UJC3 728 aaKnown RBP10.23□□□□□ -0.77
SF3B3-204ENST00000563739 PHTF1Q9UMS5 762 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 NTNG1Q9Y2I2 539 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 SIK3Q9Y2K2 1263 aa10.23□□□□□ -0.77
SF3B3-204ENST00000563739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 PIPSLA2A3N6 862 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 EEF2KO00418 725 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 CBX6O95503 412 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 TYRP1P17643 537 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 NFKBIAP25963 317 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 MAN1A1P33908 653 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 SOX5P35711 763 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 GARSP41250 739 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 CAPZBP47756 277 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 PGDP52209 483 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 COPB1P53618 953 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 FOXM1Q08050 763 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 BIRC2Q13490 618 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 ZNF648Q5T619 568 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 HENMT1Q5T8I9 393 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 PWWP2BQ6NUJ5 590 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 TMEM26Q6ZUK4 368 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 CHST15Q7LFX5 561 aaPredicted RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 SLC38A9Q8NBW4 561 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 ZNF599Q96NL3 588 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 TGM7Q96PF1 710 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 HERPUD2Q9BSE4 406 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 ZMYND15Q9H091 742 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 DHX35Q9H5Z1 703 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 SAMSN1Q9NSI8 373 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 KCTD5Q9NXV2 234 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 CWC15Q9P013 229 aaKnown RBP10.22□□□□□ -0.77
SF3B3-204ENST00000563739 LNPEPQ9UIQ6 1025 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 CCDC88CQ9P219 2028 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 PIKFYVEQ9Y2I7 2098 aa10.22□□□□□ -0.77
SF3B3-204ENST00000563739 CCDC168Q8NDH2 2452 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 IGHV5-51A0A0C4DH38 117 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 KIR2DS5A0A0G2JLQ3 304 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 A0A0G2JNG1 304 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 A0A0J9YYE9 177 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 C21orf140B9A014 251 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 KIR2DS3K7RE56 304 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 TRBC1P01850 177 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 CAPN1P07384 714 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 CYP2A6P11509 494 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-204ENST00000563739 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-204ENST00000563739 FOLR1P15328 257 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 IL1R2P27930 398 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 CLCNKAP51800 687 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 GPS2Q13227 327 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 IL11RAQ14626 422 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 KCNAB1Q14722 419 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 KIR2DS5Q14953 304 aa10.21□□□□□ -0.77
SF3B3-204ENST00000563739 NR6A1Q15406 480 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms