RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZCCHC17Q9NP64 241 aaKnown RBP5.05□□□□□ -1.6
LINC00254-201ENST00000563416 IRAK4Q9NWZ3 460 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 HDAC6Q9UBN7 1215 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 RAI2Q9Y5P3 530 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 MCM3APO60318 1980 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 LCTP09848 1927 aa5.05□□□□□ -1.6
LINC00254-201ENST00000563416 BRCA2P51587 3418 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 A0A087X0M5 115 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 A0A1B0GX30 115 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 SH2D7A6NKC9 451 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 KRTAP29-1A8MX34 341 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 RNF113AO15541 343 aaKnown RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 LDB2O43679 373 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ITM2AO43736 263 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 GLUD1P00367 558 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 PRSS2P07478 247 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 NAGAP17050 411 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 GLUD2P49448 558 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 NUDT6P53370 316 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ARSFP54793 590 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 UBE3AQ05086 875 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 GABPAQ06546 454 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 LTBQ06643 244 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ME3Q16798 604 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF284Q2VY69 593 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 DCAF6Q58WW2 860 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 UBAP2Q5T6F2 1119 aaKnown RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ATG9BQ674R7 924 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 TATDN1Q6P1N9 297 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 FAM83HQ6ZRV2 1179 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 NEK10Q6ZWH5 1172 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 BHLHA9Q7RTU4 235 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 SPATA2LQ8IUW3 424 aaPredicted RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 CPOQ8IVL8 374 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ADAMTS15Q8TE58 950 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 SDR42E1Q8WUS8 393 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 HTRA1Q92743 480 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 NEUROG1Q92886 237 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 RNF183Q96D59 192 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 MED30Q96HR3 178 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 MAELQ96JY0 434 aaKnown RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 NUDT16L1Q9BRJ7 211 aaKnown RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 PLEKHA5Q9HAU0 1116 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 WDR6Q9NNW5 1121 aaKnown RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 OLA1Q9NTK5 396 aaKnown RBP5.04□□□□□ -1.6
LINC00254-201ENST00000563416 RNF186Q9NXI6 227 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 NSMCE4AQ9NXX6 385 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 WWOXQ9NZC7 414 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 ZNF580Q9UK33 172 aa5.04□□□□□ -1.6
LINC00254-201ENST00000563416 CCL15-CCL14A0A0B4J2E2 113 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.03□□□□□ -1.6
LINC00254-201ENST00000563416 CXCL11O14625 94 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 GPAA1O43292 621 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 PRKAB2O43741 272 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 TMCC2O75069 709 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 ASNSP08243 561 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 ACAA1P09110 424 aaPredicted RBP5.03□□□□□ -1.6
LINC00254-201ENST00000563416 CBSLP0DN79 551 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 PTMSP20962 102 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 SHMT1P34896 483 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 CBSP35520 551 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 LBX1P52954 281 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 PMS2P54278 862 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 ABATP80404 500 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 NAA25Q14CX7 972 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 CCL15Q16663 113 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 CCDC96Q2M329 555 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 EDRF1Q3B7T1 1238 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 SBK1Q52WX2 424 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
LINC00254-201ENST00000563416 C12orf60Q5U649 245 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 RUSC1-AS1Q66K80 236 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 ITPRIPL1Q6GPH6 555 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 NAPEPLDQ6IQ20 393 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 C8orf82Q6P1X6 216 aaPredicted RBP5.03□□□□□ -1.6
LINC00254-201ENST00000563416 BBS12Q6ZW61 710 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 PRSS45Q7RTY3 260 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 OR8H2Q8N162 312 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 OR14A16Q8NHC5 309 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 RASSF8Q8NHQ8 419 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 TMEM170AQ8WVE7 144 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 RAB40AQ8WXH6 277 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 OTULINQ96BN8 352 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 C7orf26Q96N11 449 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 FSD1Q9BTV5 496 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 MROH8Q9H579 483 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 TNRC18O15417 2968 aaPredicted RBP5.03□□□□□ -1.6
LINC00254-201ENST00000563416 PLIN4Q96Q06 1357 aa5.03□□□□□ -1.6
LINC00254-201ENST00000563416 ZMYM6O95789 1325 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 C17orf113A0A1B0GUU1 675 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 KDM4EB2RXH2 506 aaPredicted RBP5.02□□□□□ -1.61
LINC00254-201ENST00000563416 SLC28A2O43868 658 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 ZBED4O75132 1171 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 GUCY1B2O75343 617 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 SOX30O94993 753 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CETPP11597 493 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 CTPS1P17812 591 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 THPOP40225 353 aa5.02□□□□□ -1.61
LINC00254-201ENST00000563416 GPD2P43304 727 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms