RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NENFQ9UMX5 172 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 RPL26L1Q9UNX3 145 aaKnown RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 ADGRG1Q9Y653 693 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 BZW2Q9Y6E2 419 aaKnown RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 A0A1W2PQJ5 194 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 SERPINC1P01008 464 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 SERPING1P05155 500 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 PRKAR1AP10644 381 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 F3P13726 295 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 CD86P42081 329 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 MAPK9P45984 424 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 HADHQ16836 314 aaKnown RBP16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 SKIDA1Q1XH10 827 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 COLEC12Q5KU26 742 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 SLC9B2Q86UD5 537 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 CNTD1Q8N815 330 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 KCTD6Q8NC69 237 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 EPN3Q9H201 632 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 PRDM8Q9NQV8 689 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 DTLQ9NZJ0 730 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 SCHIP1Q9P0W5 487 aaPredicted RBP16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 ATXN10Q9UBB4 475 aa16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 TMEM184BQ9Y519 407 aaPredicted RBP16.61■□□□□ 0.25
HDGFL3-203ENST00000563404 ANKRD66B4E2M5 251 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 GRID2O43424 1007 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 NUAK1O60285 661 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 STK17BO94768 372 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 DLGAP3O95886 979 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 JCHAINP01591 159 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 ZNF8P17098 575 aaPredicted RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 MAP4P27816 1152 aaKnown RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 OAS2P29728 719 aaKnown RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 CCR10P46092 362 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 EPHA4P54764 986 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 UBE2IP63279 158 aaKnown RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 ZBTB17Q13105 803 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 ATP1A1-AS1Q5TC04 95 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 ALKBH5Q6P6C2 394 aaKnown RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 CEACAM20Q6UY09 585 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 CPLX3Q8WVH0 158 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 HDAC11Q96DB2 347 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 RNF31Q96EP0 1072 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 HERPUD2Q9BSE4 406 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 MLPHQ9BV36 600 aaPredicted RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 BRD8Q9H0E9 1235 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 CARD9Q9H257 536 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 RMI1Q9H9A7 625 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 GPN2Q9H9Y4 310 aaPredicted RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 SIDT1Q9NXL6 827 aaKnown RBP16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 PKD2L2Q9NZM6 624 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 OGFRQ9NZT2 677 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 CPNE7Q9UBL6 633 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 TUBD1Q9UJT1 453 aa16.6■□□□□ 0.25
HDGFL3-203ENST00000563404 KIR2DS5A0A0G2JLQ3 304 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 A0A0G2JNG1 304 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 KIR2DS3K7RE56 304 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 KCNK1O00180 336 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 CAPN5O15484 640 aaPredicted RBP16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 PROSCO94903 275 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 CA4P22748 312 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 GFERP55789 205 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 FANCCQ00597 558 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 CDC20Q12834 499 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 GALNT3Q14435 633 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 KIR2DS5Q14953 304 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 PDK2Q15119 407 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 CCDC13Q8IYE1 715 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 GPR26Q8NDV2 337 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 RAPGEF5Q92565 580 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 SH3KBP1Q96B97 665 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 CATSPER2Q96P56 530 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 PLEKHG4BQ96PX9 1271 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 TRIB3Q96RU7 358 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 ZPBPQ9BS86 351 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 OR2AG1Q9H205 316 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 STN1Q9H668 368 aaKnown RBP16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 SLC23A2Q9UGH3 650 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 CAPN11Q9UMQ6 739 aa16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 MRPS18BQ9Y676 258 aaKnown RBP16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 MN1Q10571 1320 aaPredicted RBP16.59■□□□□ 0.25
HDGFL3-203ENST00000563404 RGSL1A5PLK6 1076 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 LILRA5A6NI73 299 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 PIRTP0C851 137 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF28P17035 718 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 MX2P20592 715 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 F8A1P23610 371 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 CLCNKAP51800 687 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 ZBED6P86452 979 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 ABHD18Q0P651 414 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 ALS2CLQ60I27 953 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 ADGRG6Q86SQ4 1221 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 CCNYQ8ND76 341 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 CCHCR1Q8TD31 782 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 PACSIN1Q9BY11 444 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 ZNF71Q9NQZ8 489 aaPredicted RBP16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 KLC4Q9NSK0 619 aa16.58■□□□□ 0.24
HDGFL3-203ENST00000563404 SLC30A1Q9Y6M5 507 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms