RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ZNF587BE7ETH6 402 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 TGFB1I1O43294 461 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC25A12O75746 678 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC22A3O75751 556 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 IL7RP16871 459 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 UBA1P22314 1058 aaKnown RBP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 KCNA5P22460 613 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 ICAM3P32942 547 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 F2RL1P55085 397 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 ZBED6P86452 979 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 MPP1Q00013 466 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 PDE1BQ01064 536 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 RELQ04864 619 aaPredicted RBP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC20A2Q08357 652 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 DCST1Q5T197 706 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 FOXL2NBQ6ZUU3 175 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 MARK2Q7KZI7 788 aaKnown RBP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 ODF3L1Q8IXM7 274 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 FRMD1Q8N878 549 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 SGCDQ92629 289 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 IGSF8Q969P0 613 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 ARHGEF26Q96DR7 871 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 QRFPRQ96P65 431 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 MTERF1Q99551 399 aaKnown RBP3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 CMKLR1Q99788 373 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 PLEKHA5Q9HAU0 1116 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 LTB4R2Q9NPC1 389 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC7A10Q9NS82 523 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 EHD2Q9NZN4 543 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 PADI1Q9ULC6 663 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 KCNE2Q9Y6J6 123 aa3.04□□□□□ -1.92
HDGFL3-202ENST00000562702 TOP2AP11388 1531 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TOPBP1Q92547 1522 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 PDS5AQ29RF7 1337 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 A0A1W2PS18 150 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 B4E171 279 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 HS3ST1O14792 307 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 EPB41L2O43491 1005 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 NDUFS3O75489 264 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 JRKO75564 520 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TBX18O95935 607 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 CETPP11597 493 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 CDH1P12830 882 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 CHMP24386 653 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 PBX3P40426 434 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TSPAN7P41732 249 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 ZNF132P52740 706 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TAS2R38P59533 333 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 RPS3AP61247 264 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 EEF1A1P68104 462 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TFAP4Q01664 338 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 GRIK2Q13002 908 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 MAD2L1Q13257 205 aaPredicted RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 ADIPOQQ15848 244 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 MYLK3Q32MK0 819 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 GPATCH4Q5T3I0 446 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 EEF1A1P5Q5VTE0 462 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TTI2Q6NXR4 508 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 BRAT1Q6PJG6 821 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 GFRALQ6UXV0 394 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TMTC3Q6ZXV5 915 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC26A9Q7LBE3 791 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 GPR180Q86V85 440 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 SATL1Q86VE3 508 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TMEM219Q86XT9 240 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 KMT5CQ86Y97 462 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 C1orf87Q8N0U7 546 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 SPAG16Q8N0X2 631 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 OR14L1PQ8NHC6 308 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TDRD7Q8NHU6 1098 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 THAP6Q8TBB0 222 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 DUSP19Q8WTR2 217 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 SLC20A1Q8WUM9 679 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 DNAAF4Q8WXU2 420 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 APBB2Q92870 758 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 ABTB1Q969K4 478 aaPredicted RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TAAR8Q969N4 342 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 GRAMD2BQ96HH9 432 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TTC14Q96N46 770 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 NAP1L4Q99733 375 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 DCTN5Q9BTE1 182 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 SIL1Q9H173 461 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 FKRPQ9H9S5 495 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 RANGRFQ9HD47 186 aaPredicted RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 DIAPH3Q9NSV4 1193 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 ABCF3Q9NUQ8 709 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 TMEM30AQ9NV96 361 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 CWC15Q9P013 229 aaKnown RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 UBA2Q9UBT2 640 aaPredicted RBP3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 ACSL5Q9ULC5 683 aa3.03□□□□□ -1.92
HDGFL3-202ENST00000562702 CCDC88BA6NC98 1476 aa3.03□□□□□ -1.93
HDGFL3-202ENST00000562702 PTPRCP08575 1304 aa3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 A0A1W2PQF6 199 aa3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 HCRTR2O43614 444 aa3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 MBD4O95243 580 aa3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 AMBPP02760 352 aa3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 HLA-DOBP13765 273 aa3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 CDH2P19022 906 aaPredicted RBP3.02□□□□□ -1.93
HDGFL3-202ENST00000562702 CORO1AP31146 461 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms