RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PAN2Q504Q3 1202 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 RGMBQ6NW40 437 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 ADGRG5Q8IZF4 528 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 TRPV3Q8NET8 790 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 OR6F1Q8NGZ6 308 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 SLC22A17Q8WUG5 538 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 FAM149B1Q96BN6 582 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 RMDN1Q96DB5 314 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 FTHL17Q9BXU8 183 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 DSN1Q9H410 356 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 PLSCR3Q9NRY6 295 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 GMIPQ9P107 970 aa13.96□□□□□ -0.17
GTF3C1-203ENST00000562609 BCLAF3A2AJT9 711 aaKnown RBP13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 C16orf96A6NNT2 1141 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 NRP2O60462 931 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 C2P06681 752 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 NDUFV1P49821 464 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 TAF6P49848 677 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 CRYBB1P53674 252 aaPredicted RBP13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 PITX1P78337 314 aaPredicted RBP13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 SUZ12Q15022 739 aaKnown RBP13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 ZFP69Q49AA0 526 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 WSCD1Q658N2 575 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 FSTL4Q6MZW2 842 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 PRR23CQ6ZRP0 262 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 NEK10Q6ZWH5 1172 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 SPATC1Q76KD6 591 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 PYROXD2Q8N2H3 581 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 OR9I1Q8NGQ6 314 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 OR13J1Q8NGT2 312 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 TRIM63Q969Q1 353 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 PGLYRP2Q96PD5 576 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 GAD1Q99259 594 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 PAAF1Q9BRP4 392 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 TASP1Q9H6P5 420 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 C12orf4Q9NQ89 552 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 DERAQ9Y315 318 aa13.96□□□□□ -0.18
GTF3C1-203ENST00000562609 MANSC4A6NHS7 340 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CENPXA8MT69 81 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 H0YAE9 185 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 HUS1O60921 280 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 NDUFS2O75306 463 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 USP12O75317 370 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 GLRBP48167 497 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CDC42EP1Q00587 391 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 ACAP2Q15057 778 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CYP51A1Q16850 503 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 GDF6Q6KF10 455 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CCBE1Q6UXH8 406 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 PELI3Q8N2H9 469 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CELF2-AS1Q8N7Q2 184 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CCNYL1Q8N7R7 359 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 SIMC1Q8NDZ2 872 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 PCDH19Q8TAB3 1148 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 LRCH3Q96II8 777 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 DMRTB1Q96MA1 342 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CCDC90BQ9GZT6 254 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 ST3GAL5Q9UNP4 418 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 PDZK1P1A8MUH7 402 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 NME4O00746 187 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 TSPAN9O75954 239 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 GABARAPO95166 117 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 M6PRP20645 277 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 ENPP1P22413 925 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 ARNTP27540 789 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 RFC2P35250 354 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 MAGEA12P43365 314 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 RBM48Q5RL73 367 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 GRTP1Q5TC63 336 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 AGAP6Q5VW22 663 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM45BPQ6NSW5 357 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 ZYG11AQ6WRX3 759 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 CLEC14AQ86T13 490 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 SLC51BQ86UW2 128 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 KDM1BQ8NB78 822 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM45AQ8TCE6 357 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 JPH3Q8WXH2 748 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 AGAP4Q96P64 663 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 IL22Q9GZX6 179 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 MIOSQ9NXC5 875 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 NUDT5Q9UKK9 219 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 MFHAS1Q9Y4C4 1052 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 SNX5Q9Y5X3 404 aa13.95□□□□□ -0.18
GTF3C1-203ENST00000562609 B8ZZF3 427 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 APOL1O14791 398 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 INPP4BO15327 924 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 ZW10O43264 779 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 CD4P01730 458 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 CD68P34810 354 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 GJA9P57773 515 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 CYP20A1Q6UW02 462 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 THAP5Q7Z6K1 395 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM35AQ86V20 835 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM131BQ86XD5 332 aa13.94□□□□□ -0.18
GTF3C1-203ENST00000562609 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms