RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 CHMP4BQ9H444 224 aaKnown RBP5.84□□□□□ -1.47
TCF4-213ENST00000562543 DPEP3Q9H4B8 488 aa5.84□□□□□ -1.47
TCF4-213ENST00000562543 LRTM1Q9HBL6 345 aa5.84□□□□□ -1.47
TCF4-213ENST00000562543 BEX4Q9NWD9 120 aaPredicted RBP5.84□□□□□ -1.47
TCF4-213ENST00000562543 ARHGEF38Q9NXL2 777 aa5.84□□□□□ -1.47
TCF4-213ENST00000562543 FBLN5Q9UBX5 448 aa5.84□□□□□ -1.47
TCF4-213ENST00000562543 MEMO1Q9Y316 297 aa5.84□□□□□ -1.47
TCF4-213ENST00000562543 SEC16AO15027 2179 aa5.84□□□□□ -1.47
TCF4-213ENST00000562543 FAM237BA0A1B0GVD1 139 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 SH3D21A4FU49 640 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 A8MU76 341 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 TOR1BO14657 336 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 MCF2LO15068 1137 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ARHGEF9O43307 516 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 KLHL41O60662 606 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 SLC19A2O60779 497 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 PIGRP01833 764 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 MT-ND3P03897 115 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 FAM157CP0CG43 387 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ZNF165P49910 485 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 VAV2P52735 878 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 RCAN1P53805 252 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 CASP6P55212 293 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 DCAF7P61962 342 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 SRSF2Q01130 221 aaKnown RBP5.83□□□□□ -1.48
TCF4-213ENST00000562543 DMTNQ08495 405 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 CCDC15Q0P6D6 951 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 MIDNQ504T8 468 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 RNF219Q5W0B1 726 aaPredicted RBP5.83□□□□□ -1.48
TCF4-213ENST00000562543 KCTD16Q68DU8 428 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 RPUSD3Q6P087 351 aaKnown RBP5.83□□□□□ -1.48
TCF4-213ENST00000562543 MMS22LQ6ZRQ5 1243 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 GPRIN1Q7Z2K8 1008 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ZSCAN30Q86W11 494 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 CARFQ8N187 725 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 CPSF7Q8N684 471 aaKnown RBP5.83□□□□□ -1.48
TCF4-213ENST00000562543 C3orf20Q8ND61 904 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ASB12Q8WXK4 309 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ALG3Q92685 438 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 CCDC127Q96BQ5 260 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 BICD1Q96G01 975 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 SGSM3Q96HU1 749 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 AKIRIN1Q9H9L7 192 aaPredicted RBP5.83□□□□□ -1.48
TCF4-213ENST00000562543 C17orf75Q9HAS0 396 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■□□□ 14.2
TCF4-213ENST00000562543 LNPEPQ9UIQ6 1025 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 SIX4Q9UIU6 781 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ABCA1O95477 2261 aa5.83□□□□□ -1.48
TCF4-213ENST00000562543 ATP8B3O60423 1300 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 PP2D1A8MPX8 630 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 RNF103O00237 685 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 SOCS6O14544 535 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 HNRNPDLO14979 420 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 TBL1XO60907 577 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 BEST1O76090 585 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 ZNF202O95125 648 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 TNFRSF1AP19438 455 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 ACOT2P49753 483 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 LIG4P49917 911 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 RPS15P62841 145 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 POU5F1Q01860 360 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 RBPJQ06330 500 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 ATP1A4Q13733 1029 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 TRIM29Q14134 588 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 PCBP2Q15366 365 aaKnown RBP eCLIP5.82□□□□□ -1.48
TCF4-213ENST00000562543 CHRFAM7AQ494W8 412 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 FSCBQ5H9T9 825 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 SLC39A4Q6P5W5 647 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 ERN2Q76MJ5 926 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 TAF8Q7Z7C8 310 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 SCD5Q86SK9 330 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 CXorf67Q86X51 503 aaPredicted RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 GALNT16Q8N428 558 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 ZBTB2Q8N680 514 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 B3GALNT2Q8NCR0 500 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 GOT1L1Q8NHS2 421 aaPredicted RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 KIAA1524Q8TCG1 905 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 PHF10Q8WUB8 498 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 WASF1Q92558 559 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 SDCCAG3Q96C92 435 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 PDXPQ96GD0 296 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 SMARCD1Q96GM5 515 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 PTCHD1Q96NR3 888 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 TAAR6Q96RI8 345 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 CDK5RAP1Q96SZ6 601 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 NAP1L4Q99733 375 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 SMOQ99835 787 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 SYT3Q9BQG1 590 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 MRPL45Q9BRJ2 306 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 BACH2Q9BYV9 841 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 DPEP2Q9H4A9 486 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 GP6Q9HCN6 339 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 CLIC5Q9NZA1 410 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 ITGA11Q9UKX5 1188 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 FARSAQ9Y285 508 aaKnown RBP5.82□□□□□ -1.48
TCF4-213ENST00000562543 DOCK10Q96BY6 2186 aa5.82□□□□□ -1.48
TCF4-213ENST00000562543 IGLON5A6NGN9 336 aa5.81□□□□□ -1.48
TCF4-213ENST00000562543 KPNA3O00505 521 aaPredicted RBP5.81□□□□□ -1.48
TCF4-213ENST00000562543 LATS1O95835 1130 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms