RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TRAM1L1Q8N609 369 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 ARL10Q8N8L6 244 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 GLIS1Q8NBF1 620 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 OR52K1Q8NGK4 314 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 OR13C4Q8NGS5 318 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 ZDHHC1Q8WTX9 485 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 NAT14Q8WUY8 206 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 UBE2Q2Q8WVN8 375 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 PATE1Q8WXA2 126 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 GLYATL1Q969I3 302 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
HERC1-212ENST00000561348 PBKQ96KB5 322 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 IL26Q9NPH9 171 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 SPATS2LQ9NUQ6 558 aaKnown RBP10.03□□□□□ -0.8
HERC1-212ENST00000561348 NCKIPSDQ9NZQ3 722 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 TAAR2Q9P1P5 351 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 ATXN10Q9UBB4 475 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 FKBPLQ9UIM3 349 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 CNOT6Q9ULM6 557 aaKnown RBP10.03□□□□□ -0.8
HERC1-212ENST00000561348 TTC7AQ9ULT0 858 aaPredicted RBP10.03□□□□□ -0.8
HERC1-212ENST00000561348 SLC17A4Q9Y2C5 497 aa10.03□□□□□ -0.8
HERC1-212ENST00000561348 LRP4O75096 1905 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 RHPN2P1A8MT19 583 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 CASC3O15234 703 aaKnown RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 GRID2O43424 1007 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 OPA1O60313 960 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 PRAMEF1O95521 474 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 ECEL1O95672 775 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 IVLP07476 585 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 ZNF8P17098 575 aaPredicted RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 ACP1P24666 158 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 ALDH4A1P30038 563 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 RPL22P35268 128 aaKnown RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 ADRA1AP35348 466 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 FDFT1P37268 417 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 E2F1Q01094 437 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 TARDBPQ13148 414 aaKnown RBP eCLIP10.02□□□□□ -0.816e-10■■■■■ 35.5
HERC1-212ENST00000561348 TAF1AQ15573 450 aaPredicted RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 AMZ1Q400G9 498 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 PYCR3Q53H96 274 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 ZRANB3Q5FWF4 1079 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 MICALCLQ6ZW33 695 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 TAS2R42Q7RTR8 314 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 C17orf53Q8N3J3 647 aaPredicted RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 SDR16C5Q8N3Y7 309 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 ZNF398Q8TD17 642 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 BRSK1Q8TDC3 778 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 COG1Q8WTW3 980 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 CCDC74AQ96AQ1 378 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 COX14Q96I36 57 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 PDLIM2Q96JY6 352 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 OSBPL9Q96SU4 736 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 CCDC3Q9BQI4 270 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 BOCQ9BWV1 1114 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 ASB8Q9H765 288 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 TRIM39Q9HCM9 518 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 KLC4Q9NSK0 619 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 TRNAU1APQ9NX07 287 aaKnown RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 IL17CQ9P0M4 197 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 PAK5Q9P286 719 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 CRLS1Q9UJA2 301 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 CLCA2Q9UQC9 943 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 PCDHGA1Q9Y5H4 931 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 PCYT1BQ9Y5K3 369 aaPredicted RBP10.02□□□□□ -0.81
HERC1-212ENST00000561348 AK5Q9Y6K8 562 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 SLC30A1Q9Y6M5 507 aa10.02□□□□□ -0.81
HERC1-212ENST00000561348 COL5A1P20908 1838 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 LY6G6EA0A0G2JKS1 128 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 GOLGA6L10A0A0M3HER8 536 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 OR2AG2A6NM03 316 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 PDZK1P1A8MUH7 402 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 PGRMC1O00264 195 aaKnown RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 AP2A1O95782 977 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 MT-CO3P00414 261 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 MSH3P20585 1137 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 TEAD1P28347 426 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 MC4RP32245 332 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 GRIA1P42261 906 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 MAPK9P45984 424 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 SESN2P58004 480 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 DCDC1P59894 354 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 INSM1Q01101 510 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 TMEM115Q12893 351 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 ILKQ13418 452 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 ITGA9Q13797 1035 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 SPIDRQ14159 915 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 SIX1Q15475 284 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 KHDC1Q4VXA5 237 aaKnown RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 C14orf28Q4W4Y0 310 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 CERCAMQ5T4B2 595 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 ZDHHC20Q5W0Z9 365 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 LVRNQ6Q4G3 990 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 TMPRSS7Q7RTY8 843 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 ADGRG6Q86SQ4 1221 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 LINC00523Q86TU6 105 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 ZNF761Q86XN6 746 aaPredicted RBP10.01□□□□□ -0.81
HERC1-212ENST00000561348 NRROSQ86YC3 692 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 PRELID2Q8N945 189 aa10.01□□□□□ -0.81
HERC1-212ENST00000561348 FAM181AQ8N9Y4 354 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms