RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 COPS8Q99627 209 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 CAB39LQ9H9S4 337 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 LMAN1LQ9HAT1 526 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 GPAMQ9HCL2 828 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 ARHGEF3Q9NR81 526 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 ZDHHC3Q9NYG2 299 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 GNPTGQ9UJJ9 305 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 MID2Q9UJV3 735 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 CA14Q9ULX7 337 aa10.23□□□□□ -0.77
USP3-219ENST00000561326 A0A1W2PP55 124 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 A0A1W2PQF6 199 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 E5RI56 91 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 PLK4O00444 970 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 MMP20O60882 483 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 TM7SF2O76062 418 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 RECQL5O94762 991 aaPredicted RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 KLHL2O95198 593 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 BMP1P13497 986 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 CHRM3P20309 590 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 RPS3P23396 243 aaKnown RBP eCLIP10.22□□□□□ -0.77
USP3-219ENST00000561326 DRD3P35462 400 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 ETV3P41162 512 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 NSG1P42857 185 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 DGKEP52429 567 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 COPAP53621 1224 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 STARD6P59095 220 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 GNGT1P63211 74 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 RPS21P63220 83 aaKnown RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 CREB5Q02930 508 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 DPTQ07507 201 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 SGCGQ13326 291 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 MPP2Q14168 576 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 CRY1Q16526 586 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 DBN1Q16643 649 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 ATP13A5Q4VNC0 1218 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 PPM1JQ5JR12 505 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 LDLRAP1Q5SW96 308 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 RBM20Q5T481 1227 aaKnown RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 HENMT1Q5T8I9 393 aaKnown RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 IER5LQ5T953 404 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 AGAP9Q5VTM2 703 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 NEK5Q6P3R8 708 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 ZNF549Q6P9A3 640 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 CMC1Q7Z7K0 106 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 CEP97Q8IW35 865 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 TRIM42Q8IWZ5 723 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 AADATQ8N5Z0 425 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 CCDC63Q8NA47 563 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 SCAMP4Q969E2 229 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 NUS1Q96E22 293 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 VPS35Q96QK1 796 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 NDNQ99608 321 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 RIOK2Q9BVS4 552 aaKnown RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 TSSK1BQ9BXA7 367 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 C1QTNF7Q9BXJ2 289 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 MKRN2Q9H000 416 aaKnown RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 ABCG8Q9H221 673 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 SMOXQ9NWM0 555 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 PSD3Q9NYI0 1048 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 CD84Q9UIB8 345 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 FZD4Q9ULV1 537 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 RUVBL2Q9Y230 463 aaKnown RBP10.22□□□□□ -0.77
USP3-219ENST00000561326 ITM2BQ9Y287 266 aa10.22□□□□□ -0.77
USP3-219ENST00000561326 XIRP2A4UGR9 3374 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3DA0A087WVF3 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3IA0A087WXS9 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3EA0A087X179 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3KA0A087X1G2 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 KANSL1LA0AUZ9 987 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3FA6NER0 549 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 FAM170BA6NMN3 283 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 SRRM3A6NNA2 597 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 CHURC1-FNTBB4DL54 471 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3LB9A6J9 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 QSOX1O00391 747 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 STK25O00506 426 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 KPNA5O15131 536 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 BIRC5O15392 142 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 PHGDHO43175 533 aaKnown RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 OR1I1O60431 355 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 SLC25A14O95258 325 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 ASMTLO95671 621 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 F7P08709 466 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 RBP1P09455 135 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 LTA4HP09960 611 aaKnown RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 OR56A5P0C7T3 313 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 TBC1D3HP0C7X1 549 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 SLC35E2BP0CK96 405 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 PRSS56P0CW18 603 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 C7P10643 843 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 CHRNB1P11230 501 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 C6P13671 934 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 ATP1B2P14415 290 aaPredicted RBP10.21□□□□□ -0.77
USP3-219ENST00000561326 MSH3P20585 1137 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 FDXRP22570 491 aa10.21□□□□□ -0.77
USP3-219ENST00000561326 AKT1P31749 480 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms