RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 MTSS1O43312 755 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 JMJD7P0C870 316 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 BPIP17213 487 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 ITIH1P19827 911 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 CSF2RBP32927 897 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 CHRNA4P43681 627 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 WNT3AP56704 352 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 BROXQ5VW32 411 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 USP53Q70EK8 1073 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 TMC3Q7Z5M5 1100 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 HTR3CQ8WXA8 447 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 OXNAD1Q96HP4 312 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZSCAN5AQ9BUG6 496 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 LACRTQ9GZZ8 138 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 C10orf88Q9H8K7 445 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 CPNE5Q9HCH3 593 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 ATXN10Q9UBB4 475 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
CDC42BPB-208ENST00000561271 APOC4-APOC2K7ER74 178 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 APOC2P02655 101 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZNF8P17098 575 aaPredicted RBP17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 ETV5P41161 510 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 NAP1L1P55209 391 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 TMPRSS3P57727 454 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 C16orf72Q14CZ0 275 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 PLA2G4EQ3MJ16 856 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 SIRPB2Q5JXA9 342 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 CCDC181Q5TID7 509 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 NKAIN2Q5VXU1 208 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 CCDC70Q6NSX1 233 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 CRTC3Q6UUV7 619 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 PIM3Q86V86 326 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 TRAM1L1Q8N609 369 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 IPMKQ8NFU5 416 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 MRGPRX2Q96LB1 330 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 ZMYND15Q9H091 742 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 OR2AG1Q9H205 316 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 RMI1Q9H9A7 625 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 BPIFA1Q9NP55 256 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 TBC1D29Q9UFV1 150 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 RSPH14Q9UHP6 348 aa17.02■□□□□ 0.32
CDC42BPB-208ENST00000561271 HACD1B0YJ81 288 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 H7C0C1 242 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 PJA2O43164 708 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 GRID2O43424 1007 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 NUAK1O60285 661 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 MTX2O75431 263 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC25A14O95258 325 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 CD1CP29017 333 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC5A2P31639 672 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 GPR3P46089 330 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 FASLGP48023 281 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 ATP5OP48047 213 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 VAV2P52735 878 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 OTUD4Q01804 1114 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 PID1Q7Z2X4 250 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 GPR155Q7Z3F1 870 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 PHYKPLQ8IUZ5 450 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 SFRP1Q8N474 314 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 RCBTB1Q8NDN9 531 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 ACTL9Q8TC94 416 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 GLYATL1Q969I3 302 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 CCDC74BQ96LY2 380 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 FCRL5Q96RD9 977 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 UBL7Q96S82 380 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 VAT1Q99536 393 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 FAM118BQ9BPY3 351 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 DPH1Q9BZG8 443 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 CARD9Q9H257 536 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 RAD18Q9NS91 495 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 WDR70Q9NW82 654 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 KCNK4Q9NYG8 393 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 PCDHA3Q9Y5H8 950 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 ADGRG1Q9Y653 693 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 KALRNO60229 2985 aa17.01■□□□□ 0.31
CDC42BPB-208ENST00000561271 IGHV1OR21-1A0A087WYE8 117 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 IGHV5-10-1A0A0J9YXX1 117 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 LOC285095A0A1B0GVY8 99 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 GRID2IPA4D2P6 1211 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 SNX2O60749 519 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 CTNNA2P26232 953 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 RBL1P28749 1068 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-208ENST00000561271 PPM1FP49593 454 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-208ENST00000561271 MAPK10P53779 464 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 COPS2P61201 443 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 CLN3Q13286 438 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 KHDC1Q4VXA5 237 aaKnown RBP17■□□□□ 0.31
CDC42BPB-208ENST00000561271 PDPK2PQ6A1A2 396 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 AADACL2Q6P093 401 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 ZNF574Q6ZN55 896 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-208ENST00000561271 ADGRG6Q86SQ4 1221 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 KIAA1328Q86T90 577 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 TMEM139Q8IV31 216 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 TTC30BQ8N4P2 665 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 ALG3Q92685 438 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 CMKLR1Q99788 373 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 GORASP1Q9BQQ3 440 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 GBA3Q9H227 469 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms