RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PCDHGA4Q9Y5G9 962 aa16.05■□□□□ 0.16
SNX1-213ENST00000561026 FLNBO75369 2602 aaKnown RBP16.05■□□□□ 0.16
SNX1-213ENST00000561026 PPP1R12AO14974 1030 aaPredicted RBP16.04■□□□□ 0.16
SNX1-213ENST00000561026 GRID2O43424 1007 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 DUX1O43812 170 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 NUAK1O60285 661 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 MFAP3LO75121 409 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 KRT1P04264 644 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 WT1P19544 449 aaPredicted RBP16.04■□□□□ 0.16
SNX1-213ENST00000561026 SLC1A1P43005 524 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 DCDC1P59894 354 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 CDK18Q07002 472 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 WDR74Q6RFH5 385 aaPredicted RBP16.04■□□□□ 0.16
SNX1-213ENST00000561026 XKR5Q6UX68 686 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 TMC3Q7Z5M5 1100 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 RFX6Q8HWS3 928 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 EXD3Q8N9H8 876 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 ZSCAN1Q8NBB4 408 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 GPR26Q8NDV2 337 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 ART4Q93070 314 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 SH3KBP1Q96B97 665 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 RNF25Q96BH1 459 aaPredicted RBP16.04■□□□□ 0.16
SNX1-213ENST00000561026 DDA1Q9BW61 102 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 SPATA16Q9BXB7 569 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 TRIM39Q9HCM9 518 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 OCIAD1Q9NX40 245 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 ATXN10Q9UBB4 475 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 SHOC2Q9UQ13 582 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 B3GALT1Q9Y5Z6 326 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 ADGRG1Q9Y653 693 aa16.04■□□□□ 0.16
SNX1-213ENST00000561026 KIR2DS5A0A0G2JLQ3 304 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 A0A0G2JNG1 304 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 B4E171 279 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 J3QKU1 62 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 KIR2DS3K7RE56 304 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SNX2O60749 519 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SLC25A14O95258 325 aaPredicted RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 ZIC2O95409 532 aaPredicted RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 PIRTP0C851 137 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 F3P13726 295 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SLC2A4P14672 509 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 ZNF8P17098 575 aaPredicted RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 TSPAN7P41732 249 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 NFATC2Q13469 925 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 KIR2DS5Q14953 304 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 TCEAL1Q15170 157 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SLC14A2Q15849 920 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 PCSK7Q16549 785 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 TEX44Q53QW1 395 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 ALS2CLQ60I27 953 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 B4GALNT4Q76KP1 1039 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SLC9B2Q86UD5 537 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 RHOT1Q8IXI2 618 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 JPH3Q8WXH2 748 aaPredicted RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 EXTL1Q92935 676 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 NKD1Q969G9 470 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 ZSCAN5AQ9BUG6 496 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 ASPSCR1Q9BZE9 553 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 OR2AG1Q9H205 316 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 STN1Q9H668 368 aaKnown RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 RAD18Q9NS91 495 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 SLC39A1Q9NY26 324 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 DDX56Q9NY93 547 aaKnown RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 INTUQ9ULD6 942 aa16.03■□□□□ 0.16
SNX1-213ENST00000561026 ZFC3H1O60293 1989 aaKnown RBP16.03■□□□□ 0.16
SNX1-213ENST00000561026 OR5K4A6NMS3 321 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 GPR89AB7ZAQ6 455 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 MT-CYBP00156 380 aaPredicted RBP16.02■□□□□ 0.16
SNX1-213ENST00000561026 GPR89BP0CG08 455 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 PPM1FP49593 454 aaPredicted RBP16.02■□□□□ 0.16
SNX1-213ENST00000561026 CLCNKAP51800 687 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 DYNLT1P63172 113 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 ZNF569Q5MCW4 686 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 ZNF648Q5T619 568 aaPredicted RBP16.02■□□□□ 0.16
SNX1-213ENST00000561026 PDPK2PQ6A1A2 396 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 MFSD7Q6UXD7 560 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 ARHGAP22Q7Z5H3 698 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 ADGRG6Q86SQ4 1221 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 FAM129CQ86XR2 697 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 PHYKPLQ8IUZ5 450 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 TRAM1L1Q8N609 369 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 BMPERQ8N8U9 685 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 ZMYND15Q9H091 742 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 GLOD4Q9HC38 313 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 NFKBIL1Q9UBC1 381 aaPredicted RBP16.02■□□□□ 0.16
SNX1-213ENST00000561026 CPNE7Q9UBL6 633 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 ZNF711Q9Y462 761 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 HYOU1Q9Y4L1 999 aa16.02■□□□□ 0.16
SNX1-213ENST00000561026 SDK2Q58EX2 2172 aa16.02■□□□□ 0.15
SNX1-213ENST00000561026 TENM4Q6N022 2769 aa16.02■□□□□ 0.15
SNX1-213ENST00000561026 EFCAB7A8K855 629 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 A8MU76 341 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 CHUKO15111 745 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 NDST3O95803 873 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 SLC4A1P02730 911 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms