RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 SLC30A1Q9Y6M5 507 aa16.41■□□□□ 0.22
HERC1-207ENST00000560316 CSMD1Q96PZ7 3565 aa16.41■□□□□ 0.22
HERC1-207ENST00000560316 ARGFXA6NJG6 315 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 KIF1CO43896 1103 aaKnown RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 RASSF9O75901 435 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 TIAF1O95411 115 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 FGF5P12034 268 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 SLC2A4P14672 509 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 POU3F2P20265 443 aaPredicted RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 HSPA9P38646 679 aaKnown RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 UBE2IP63279 158 aaKnown RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 ERMARDQ5T6L9 678 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 ZNF765Q7L2R6 523 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 ARFGAP1Q8N6T3 406 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 Q8NA96 180 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 PLEKHG4BQ96PX9 1271 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 MFRPQ9BY79 579 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 AKIRIN1Q9H9L7 192 aaPredicted RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 MLXIPLQ9NP71 852 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 FAM207AQ9NSI2 230 aaPredicted RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 TAB2Q9NYJ8 693 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 VPS18Q9P253 973 aa16.4■□□□□ 0.22
HERC1-207ENST00000560316 CNOT6Q9ULM6 557 aaKnown RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 PCDHGA9Q9Y5G4 932 aaKnown RBP16.4■□□□□ 0.22
HERC1-207ENST00000560316 GOLGA6L3A6NEY3 463 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 WIPF3A6NGB9 483 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 UBXN7O94888 489 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 LDLRP01130 860 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 PYGLP06737 847 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 AMD1P17707 334 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 UGT8Q16880 541 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 JMJD6Q6NYC1 403 aaPredicted RBP16.39■□□□□ 0.21
HERC1-207ENST00000560316 FAM199XQ6PEV8 388 aaPredicted RBP16.39■□□□□ 0.21
HERC1-207ENST00000560316 NLRP8Q86W28 1048 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 PPP1R3BQ86XI6 285 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 BRD8Q9H0E9 1235 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 ACSS2Q9NR19 701 aa16.39■□□□□ 0.21
HERC1-207ENST00000560316 SAMSN1Q9NSI8 373 aaKnown RBP16.39■□□□□ 0.21
HERC1-207ENST00000560316 SCHIP1Q9P0W5 487 aaPredicted RBP16.39■□□□□ 0.21
HERC1-207ENST00000560316 OR5K4A6NMS3 321 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 EIF3CLB5ME19 914 aaKnown RBP16.38■□□□□ 0.21
HERC1-207ENST00000560316 C21orf140B9A014 251 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 TOX3O15405 576 aaPredicted RBP16.38■□□□□ 0.21
HERC1-207ENST00000560316 MT-ND3P03897 115 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 DESP17661 470 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 PSMA2P25787 234 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 STC1P52823 247 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 IL10RAQ13651 578 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 DPYSQ14117 519 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.38■□□□□ 0.21
HERC1-207ENST00000560316 C1QL3Q5VWW1 255 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 PAPD7Q5XG87 772 aaKnown RBP16.38■□□□□ 0.21
HERC1-207ENST00000560316 TMEM26Q6ZUK4 368 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 THAP4Q8WY91 577 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 EIF3CQ99613 913 aaKnown RBP16.38■□□□□ 0.21
HERC1-207ENST00000560316 SLC29A3Q9BZD2 475 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 ING2Q9H160 280 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 OSGEPL1Q9H4B0 414 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 SLAMF7Q9NQ25 335 aa16.38■□□□□ 0.21
HERC1-207ENST00000560316 CWC15Q9P013 229 aaKnown RBP16.38■□□□□ 0.21
HERC1-207ENST00000560316 A0A0J9YYE9 177 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 CLDN7O95471 211 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 TRBC1P01850 177 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 ZNF30P17039 623 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 PTPN4P29074 926 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 MMP13P45452 471 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 SYCP1Q15431 976 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 TCP11X2Q5H9J9 407 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 CACHD1Q5VU97 1274 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 FAM92BQ6ZTR7 304 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 CYP4V2Q6ZWL3 525 aaPredicted RBP16.37■□□□□ 0.21
HERC1-207ENST00000560316 PRSS42Q7Z5A4 293 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 PHYKPLQ8IUZ5 450 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 NDUFAF2Q8N183 169 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 BBS5Q8N3I7 341 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 AVL9Q8NBF6 648 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 RSC1A1Q92681 617 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 C19orf60Q96EN9 201 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 PHF12Q96QT6 1004 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 WDR24Q96S15 920 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 UCK1Q9HA47 277 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 ARFGAP3Q9NP61 516 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 KLC4Q9NSK0 619 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 ETNK2Q9NVF9 386 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 ZNF451Q9Y4E5 1061 aa16.37■□□□□ 0.21
HERC1-207ENST00000560316 FBN2P35556 2912 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 FADS2P1A8MWK0 482 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 GRID2O43424 1007 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 KRT86O43790 486 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 FZD6O60353 706 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 MAFKO60675 156 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 LRCH4O75427 683 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 VIPP01282 170 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 XRCC1P18887 633 aaPredicted RBP16.36■□□□□ 0.21
HERC1-207ENST00000560316 ELAVL4P26378 380 aaKnown RBP16.36■□□□□ 0.21
HERC1-207ENST00000560316 SLC19A1P41440 591 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 EPHB1P54762 984 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 NR6A1Q15406 480 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 CHRNA6Q15825 494 aa16.36■□□□□ 0.21
HERC1-207ENST00000560316 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms