RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 PHACTR4Q8IZ21 702 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 AVL9Q8NBF6 648 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 GDAP1Q8TB36 358 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CALML6Q8TD86 181 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 TCEAL3Q969E4 200 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 DCUN1D1Q96GG9 259 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 TCF12Q99081 682 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CDC6Q99741 560 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 RTKNQ9BST9 563 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 GSDMCQ9BYG8 508 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 VPS37BQ9H9H4 285 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 L2HGDHQ9H9P8 463 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 FAM114A2Q9NRY5 505 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 APOBEC3BQ9UH17 382 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CRLS1Q9UJA2 301 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CDV3Q9UKY7 258 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CA5BQ9Y2D0 317 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 SLCO1B1Q9Y6L6 691 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 TRBV5-4A0A0C4DH59 114 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 PRSS38A1L453 326 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 C4orf47A7E2U8 309 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 FADS2P1A8MWK0 482 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SLC30A4O14863 429 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SCAMP1O15126 338 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 KMOO15229 486 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 AQP9O43315 295 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 NUAK1O60285 661 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 TMEM63AO94886 807 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 ASMTLO95671 621 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CEACAM5P06731 702 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SLC2A4P14672 509 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 PGAM1P18669 254 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 MSH3P20585 1137 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CSRP1P21291 193 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 MGAT1P26572 445 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 MC4RP32245 332 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 GRIA1P42261 906 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 TTPAP49638 278 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CLCNKAP51800 687 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 ITGA8P53708 1063 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 XIAPP98170 497 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 ILF3Q12906 894 aaKnown RBP eCLIP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 EIF2B5Q13144 721 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 OLIG2Q13516 323 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CHRNA6Q15825 494 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 ATP13A5Q4VNC0 1218 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 FASTKD1Q53R41 847 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 FAM182AQ5T1J6 154 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 RNF187Q5TA31 235 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 KIAA0930Q6ICG6 404 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 MRNIPQ6NTE8 343 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CENPUQ71F23 418 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 ZNF534Q76KX8 674 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SDCCAG8Q86SQ7 713 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 TMEM135Q86UB9 458 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 HID1Q8IV36 788 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 KIAA2013Q8IYS2 634 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 OR6C4Q8NGE1 309 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 OR13C4Q8NGS5 318 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 OR4L1Q8NH43 312 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SAP25Q8TEE9 199 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SEC14L1Q92503 715 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 DNAJC1Q96KC8 554 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 COPS8Q99627 209 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 SMOC1Q9H4F8 434 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CHRAC1Q9NRG0 131 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 TREX1Q9NSU2 369 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 NLGN3Q9NZ94 848 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 FKBPLQ9UIM3 349 aa11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 CNOT6Q9ULM6 557 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-215ENST00000560207 A0A0U1RQS6 177 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 TCRBV7S3A2A0A539 114 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 TMEM202A6NGA9 273 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 LMO7DNF2Z398 122 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 CHUKO15111 745 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 INPP4BO15327 924 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ZW10O43264 779 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 CDK14O94921 469 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 AP2A2O94973 939 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ANXA6P08133 673 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 DGKAP23743 735 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 NSG1P42857 185 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 RPL21P46778 160 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 RPIAP49247 311 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 DUSP3P51452 185 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 TMEM115Q12893 351 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 FRG1Q14331 258 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ALG11Q2TAA5 492 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ZRANB3Q5FWF4 1079 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 SPANXN3Q5MJ09 141 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ANKRD22Q5VYY1 191 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 ZNF449Q6P9G9 518 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 RFLNAQ6ZTI6 216 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 LRRTM4Q86VH4 590 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 LRRC6Q86X45 466 aa11.93□□□□□ -0.5
RABGGTA-215ENST00000560207 CNPY4Q8N129 248 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms