RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SQSTM1Q13501 440 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 TCEA2Q15560 299 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 ADGRG6Q86SQ4 1221 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 SLC13A5Q86YT5 568 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 ARL14Q8N4G2 192 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 SLC25A41Q8N5S1 370 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 BRSK1Q8TDC3 778 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 ZDHHC1Q8WTX9 485 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 CCDC74AQ96AQ1 378 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 NXPE2Q96DL1 559 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 LRIT1Q9P2V4 623 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 FEZ2Q9UHY8 353 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 PCDHB1Q9Y5F3 818 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 RNF215Q9Y6U7 377 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 B4GAT1O43505 415 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 VEGFDO43915 354 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 SLC25A14O95258 325 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 METTL18O95568 372 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 ASMTLO95671 621 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 ECEL1O95672 775 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF8P17098 575 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 PSMA3P25788 255 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 GPR3P46089 330 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 FASLGP48023 281 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 LSSP48449 732 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 GDF10P55107 478 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 CCL7P80098 99 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 PRPSAP1Q14558 356 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 RPS6KA1Q15418 735 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 SIX1Q15475 284 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 TAF1AQ15573 450 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 CLPPQ16740 277 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 ATP13A5Q4VNC0 1218 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF569Q5MCW4 686 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 DRICH1Q6PGQ1 229 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 DOK6Q6PKX4 331 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-213ENST00000560175 TMEM121Q9BTD3 319 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 TLR10Q9BXR5 811 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 BPIFA1Q9NP55 256 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 ZNHIT2Q9UHR6 403 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 GPSM3Q9Y4H4 160 aa13.07□□□□□ -0.32
SMAD3-213ENST00000560175 CHD6Q8TD26 2715 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 B4DGG1 531 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 F5H423 210 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 PPM1DO15297 605 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 GRID2O43424 1007 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 LIASO43766 372 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 LPOP22079 712 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 ACTR1BP42025 376 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 TNNT3P45378 269 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 ACTR1AP61163 376 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 XIAPP98170 497 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 ZFP36L1Q07352 338 aaKnown RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 SPIDRQ14159 915 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 P3H1Q32P28 736 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 SLC30A9Q6PML9 568 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 MARK2Q7KZI7 788 aaKnown RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 GLT6D1Q7Z4J2 308 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 SPRED1Q7Z699 444 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 C11orf96Q7Z7L8 435 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 PHYKPLQ8IUZ5 450 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF547Q8IVP9 402 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 SFRP1Q8N474 314 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 BLOC1S5Q8TDH9 187 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 PATE1Q8WXA2 126 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 LIN37Q96GY3 246 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-213ENST00000560175 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 POLR1BQ9H9Y6 1135 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 LZTFL1Q9NQ48 299 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
SMAD3-213ENST00000560175 A0A087WV48 116 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 D6RAR5 112 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 TMX2-CTNND1H3BSU7 103 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 PSMD3O43242 534 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 LDB2O43679 373 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 USP12O75317 370 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 EML2O95834 649 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 CCKBRP32239 447 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 CA5AP35218 305 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 SPAM1P38567 509 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 MAZP56270 477 aaKnown RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 PDE1BQ01064 536 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 TMEM115Q12893 351 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 OLIG2Q13516 323 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 CHRNA6Q15825 494 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 CCNG2Q16589 344 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF648Q5T619 568 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 SEL1L2Q5TEA6 688 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms