RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 SGK2Q9HBY8 427 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ABCC13Q9NSE7 274 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 KCNE2Q9Y6J6 123 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TULP3O75386 442 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CYP11B2P19099 503 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 GBX2P52951 348 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 BLMHQ13867 455 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 BRMS1LQ5PSV4 323 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 IQSEC1Q6DN90 963 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 DNAJB7Q7Z6W7 309 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CLIP4Q8N3C7 705 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 NECAB3Q96P71 396 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZYG11BQ9C0D3 744 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PDYNP01213 254 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CD247P20963 164 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CYP3A7P24462 503 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 SLC9A3P48764 834 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZYG11AQ6WRX3 759 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PAQR7Q86WK9 346 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 SVOPLQ8N434 492 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 C2orf49Q9BVC5 232 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ITGA10O75578 1167 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CD86P42081 329 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 GRK6P43250 576 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 IFI35P80217 286 aaPredicted RBP13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TEX19Q8NA77 164 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 OR10H4Q8NGA5 316 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 OR2T34Q8NGX1 318 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 OR2T3Q8NH03 318 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 NSMCE3Q96MG7 304 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TKTL2Q9H0I9 626 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TBC1D17Q9HA65 648 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 C14orf105Q9NVL8 296 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 ASXL2Q76L83 1435 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 RP2O75695 350 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 SLC6A4P31645 630 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 PQLC1Q8N2U9 271 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 CCDC120Q96HB5 630 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 HCN3Q9P1Z3 774 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
CSPG4P12-202ENST00000559989 TGDSO95455 350 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 CHAF1BQ13112 559 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 LDLRAP1Q5SW96 308 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 ABRAQ8N0Z2 381 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 GDF3Q9NR23 364 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 SETD4Q9NVD3 440 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 NOX1Q9Y5S8 564 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 U3KQV3 271 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 CPSF4LA6NMK7 179 aaKnown RBP13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 MXD1Q05195 221 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 SLC30A8Q8IWU4 369 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 TBC1D14Q9P2M4 693 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 TBC1D3BA6NDS4 549 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 H3BQF6 201 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 CABYRO75952 493 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 NDUFB10O96000 172 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 WSCD2Q2TBF2 565 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 CYTH4Q9UIA0 394 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 PLEKHA6Q9Y2H5 1048 aa13.77□□□□□ -0.2
CSPG4P12-202ENST00000559989 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 NARSO43776 548 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 TRBC1P01850 177 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 EPCAMP16422 314 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 HSD11B1P28845 292 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 PCSK9Q8NBP7 692 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 CERS2Q96G23 380 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 BORCS7-ASMTA0A0B4J1R7 106 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 C22orf31O95567 290 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 TSHRP16473 764 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 MATKP42679 507 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 SEZ6Q53EL9 994 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 HSD17B12Q53GQ0 312 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 PPP1R15BQ5SWA1 713 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 C7orf61Q8IZ16 206 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 OR10G6Q8NH81 332 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 BORCS7Q96B45 105 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 RCN3Q96D15 328 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 DPAGT1Q9H3H5 408 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 POFUT2Q9Y2G5 429 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 CAPN6Q9Y6Q1 641 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 DUSP10Q9Y6W6 482 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 IFNA4P05014 189 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 C16orf86Q6ZW13 317 aa13.77□□□□□ -0.21
CSPG4P12-202ENST00000559989 AHSA2Q719I0 299 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms