RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 DBF4BQ8NFT6 615 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 OR2T11Q8NH01 316 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ROPN1LQ96C74 230 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CCDC97Q96F63 343 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 MPP4Q96JB8 637 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 GLT1D1Q96MS3 346 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ASB2Q96Q27 587 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CDK15Q96Q40 435 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM79Q9BSE2 394 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 MAGEH1Q9H213 219 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 MRGBPQ9NV56 204 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CNOT11Q9UKZ1 510 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 AGO1Q9UL18 857 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 USP22Q9UPT9 525 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 NDUFAF1Q9Y375 327 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RAI2Q9Y5P3 530 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SLC4A7Q9Y6M7 1214 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 COMMD3-BMI1R4GMX3 469 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ARHGAP10A1A4S6 786 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 BBIP1A8MTZ0 92 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PDLIM1O00151 329 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 KDELR3O43731 214 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 TBC1D4O60343 1298 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 SNAP91O60641 907 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 NBNO60934 754 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 TSPAN12O95859 305 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 MTHFD1P11586 935 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 NCK1P16333 377 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 CR2P20023 1033 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 SLC6A2P23975 617 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 OXTRP30559 389 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 UFM1P61960 85 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 TRAF2Q12933 501 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 LSAMPQ13449 338 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 TAF1AQ15573 450 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PLA2G4EQ3MJ16 856 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PAGE3Q5JUK9 113 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 IFNEQ86WN2 208 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 CPNE9Q8IYJ1 553 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 ZFP28Q8NHY6 868 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 DNAJB14Q8TBM8 379 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 NUDT8Q8WV74 236 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 EEF1AKMT1Q8WVE0 214 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 LINGO1Q96FE5 620 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 DUS3LQ96G46 650 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 UHRF1Q96T88 793 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 SLC52A3Q9NQ40 469 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 SDR39U1Q9NRG7 319 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 SLAMF8Q9P0V8 285 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 EIF2B4Q9UI10 523 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PCTPQ9UKL6 214 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PCDHB7Q9Y5E2 793 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 GPR45Q9Y5Y3 372 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 C2orf81A6NN90 581 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 COCHO43405 550 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 BAIAP3O94812 1187 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 STAMBPO95630 424 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 F11P03951 625 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PKMP14618 531 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 HOXB8P17481 243 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 CORO1AP31146 461 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 CASP2P42575 452 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 CDH4P55283 916 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 GPNMBQ14956 572 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 FUT11Q495W5 492 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 C5orf22Q49AR2 442 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 TBCELQ5QJ74 424 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 RNF219Q5W0B1 726 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 BLOC1S3Q6QNY0 202 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 ZBTB49Q6ZSB9 765 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 ERMP1Q7Z2K6 904 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 CARM1Q86X55 608 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 LRRC58Q96CX6 371 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 HGH1Q9BTY7 390 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 EPB41L1Q9H4G0 881 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 PIF1Q9H611 641 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 DUS2Q9NX74 493 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 ABCD2Q9UBJ2 740 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 RIMKLBQ9ULI2 386 aa9.97□□□□□ -0.81
LRRC28-216ENST00000559819 OAS3Q9Y6K5 1087 aaKnown RBP9.97□□□□□ -0.81
LRRC28-216ENST00000559819 OR4F21O95013 312 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 PRAMEF12O95522 483 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 HSPA8P11142 646 aaKnown RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 ZFP36L2P47974 494 aaKnown RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 SLC11A2P49281 568 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 ATP6V0D1P61421 351 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 ARF5P84085 180 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 PLOD1Q02809 727 aaPredicted RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 BTG3Q14201 252 aaPredicted RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 HABP4Q5JVS0 413 aaKnown RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 LRRC8DQ7L1W4 858 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 CD200R1Q8TD46 325 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 DGCR14Q96DF8 476 aaKnown RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM74Q96NL1 305 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 PLEKHG4BQ96PX9 1271 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 HBEGFQ99075 208 aa9.96□□□□□ -0.81
LRRC28-216ENST00000559819 HOPXQ9BPY8 73 aaPredicted RBP9.96□□□□□ -0.81
LRRC28-216ENST00000559819 RBM38Q9H0Z9 239 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms