RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 ITIH4Q14624 930 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 PTPRCAPQ14761 206 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 CRYMQ14894 314 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 NFATC4Q14934 902 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ERCC6LQ2NKX8 1250 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 RNF187Q5TA31 235 aaPredicted RBP9.16□□□□□ -0.94
LDLR-210ENST00000559340 STEAP4Q687X5 459 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 NEPROQ6NW34 567 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 SLC23A3Q6PIS1 610 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 GCNT7Q6ZNI0 430 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 RFLNAQ6ZTI6 216 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 TRMT10CQ7L0Y3 403 aaKnown RBP9.16□□□□□ -0.94
LDLR-210ENST00000559340 HEATR4Q86WZ0 1026 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 CNPY4Q8N129 248 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 OR13J1Q8NGT2 312 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 GPR150Q8NGU9 434 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 C1orf216Q8TAB5 229 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 GSDMBQ8TAX9 411 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 MFSD3Q96ES6 412 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ZNF514Q96K75 400 aaPredicted RBP9.16□□□□□ -0.94
LDLR-210ENST00000559340 PWWP2AQ96N64 755 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 COPS8Q99627 209 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ORAI3Q9BRQ5 295 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 FAM167BQ9BTA0 163 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ANKZF1Q9H8Y5 726 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ERVMER34-1Q9H9K5 563 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 FZD3Q9NPG1 666 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 PPANQ9NQ55 473 aaKnown RBP9.16□□□□□ -0.94
LDLR-210ENST00000559340 C20orf96Q9NUD7 363 aaPredicted RBP9.16□□□□□ -0.94
LDLR-210ENST00000559340 NCDNQ9UBB6 729 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 SLC2A6Q9UGQ3 507 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 ANKRD12Q6UB98 2062 aa9.16□□□□□ -0.94
LDLR-210ENST00000559340 TRBV5-4A0A0C4DH59 114 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 KLHL33A6NCF5 533 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 AGAP14A8MT82 685 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 H3BM21 787 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 INPP4BO15327 924 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 YKT6O15498 198 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A9O60656 530 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 KCNJ13O60928 360 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ERLIN1O75477 346 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 RASGRP1O95267 797 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 TNFP01375 233 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 CFIP05156 583 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ZNF7P17097 686 aaPredicted RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A6P19224 532 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 OGNP20774 298 aaKnown RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A1P22309 533 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A4P22310 534 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 AKT1P31749 480 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 FOXN2P32314 431 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 STX2P32856 288 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A3P35503 534 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A5P35504 534 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 MPLP40238 635 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 NSG1P42857 185 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 CSNK1EP49674 416 aaKnown RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 ATXN3P54252 364 aaPredicted RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 MGAT5Q09328 741 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 PDE1CQ14123 709 aaPredicted RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 LPAL2Q16609 132 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ATP13A5Q4VNC0 1218 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 HP1BP3Q5SSJ5 553 aaPredicted RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 ENPP7Q6UWV6 458 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 CES3Q6UWW8 571 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 MACC1Q6ZN28 852 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UNC5AQ6ZN44 842 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 KIAA0408Q6ZU52 694 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 KCNMB4Q86W47 210 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 SERPINA9Q86WD7 417 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 LRRC6Q86X45 466 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 NXPE1Q8N323 547 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 PLA2G15Q8NCC3 412 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 DDHD1Q8NEL9 900 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 FUBP1Q96AE4 644 aaKnown RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 CERS2Q96G23 380 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 COX14Q96I36 57 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 C9orf72Q96LT7 481 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ZNF778Q96MU6 729 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 FCRL3Q96P31 734 aaPredicted RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 CCDC77Q9BR77 488 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 TSSK1BQ9BXA7 367 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 PARD6BQ9BYG5 372 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ARRDC1-AS1Q9H2J1 176 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 SUDS3Q9H7L9 328 aaPredicted RBP9.15□□□□□ -0.94
LDLR-210ENST00000559340 VPS37BQ9H9H4 285 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A7Q9HAW7 530 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A10Q9HAW8 530 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 UGT1A8Q9HAW9 530 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ZDHHC3Q9NYG2 299 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 VPS18Q9P253 973 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 KLQ9UEF7 1012 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 MOSPD1Q9UJG1 213 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 ANKRD6Q9Y2G4 727 aa9.15□□□□□ -0.94
LDLR-210ENST00000559340 DNMT3AQ9Y6K1 912 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms