RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 GPR3P46089 330 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 POLD2P49005 469 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CTBSQ01459 385 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 EIF3IQ13347 325 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 KIR2DS5Q14953 304 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CCNG2Q16589 344 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 LONRF2Q1L5Z9 754 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 INSCQ1MX18 579 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 MAP9Q49MG5 647 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 LDLRAP1Q5SW96 308 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CERCAMQ5T4B2 595 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AADACL2Q6P093 401 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 OGFOD3Q6PK18 319 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 KDELC1Q6UW63 502 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 FAM151BQ6UXP7 276 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 C4orf22Q6V702 233 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 RANBP10Q6VN20 620 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 RFLNAQ6ZTI6 216 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 SLC9B2Q86UD5 537 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 TRIM74Q86UV6 250 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 PIM3Q86V86 326 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 LRRTM4Q86VH4 590 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 SLC13A5Q86YT5 568 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 TRAPPC5Q8IUR0 188 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CCNJLQ8IV13 435 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 ARL14Q8N4G2 192 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 DNAAF3Q8N9W5 541 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 KYQ8NBH2 561 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 GPR26Q8NDV2 337 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 GPR156Q8NFN8 814 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CCL4L1Q8NHW4 92 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 ZDHHC1Q8WTX9 485 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 HEXDCQ8WVB3 486 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 GLYATL1Q969I3 302 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CCDC74AQ96AQ1 378 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 TMEM159Q96B96 161 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 SH3KBP1Q96B97 665 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 EID2BQ96D98 161 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 SCARF2Q96GP6 870 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 AHCYL2Q96HN2 611 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 OXNAD1Q96HP4 312 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 COX14Q96I36 57 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 TMEM74Q96NL1 305 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 VPS35Q96QK1 796 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 SMIM14Q96QK8 99 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 AGAP2Q99490 1192 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 TTC1Q99614 292 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 CMKLR1Q99788 373 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 C19orf43Q9BQ61 176 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 TBL1YQ9BQ87 522 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 HERPUD2Q9BSE4 406 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 FICDQ9BVA6 458 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 OR2AG1Q9H205 316 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 OSGEPL1Q9H4B0 414 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 C10orf88Q9H8K7 445 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 BPIFA1Q9NP55 256 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 IL26Q9NPH9 171 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 SPATS2LQ9NUQ6 558 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 ATXN10Q9UBB4 475 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 NFKBIL1Q9UBC1 381 aaPredicted RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 DKK4Q9UBT3 224 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 ZMIZ1Q9ULJ6 1067 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 U3KQA8 63 aa4.33□□□□□ -1.72
SNX1-205ENST00000559339 GOLGA4Q13439 2230 aaKnown RBP4.33□□□□□ -1.72
SNX1-205ENST00000559339 COL5A1P20908 1838 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 EPG5Q9HCE0 2579 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 GOLGA6L10A0A0M3HER8 536 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 TCRBV7S2A1N4TA0A589 114 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 F8W8V4 182 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 LIASO43766 372 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CEP104O60308 925 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 NOBOXO60393 691 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SNX2O60749 519 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 KCNJ13O60928 360 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CSO75390 466 aaKnown RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 MTX2O75431 263 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 SRP72O76094 671 aaKnown RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 PRAMEF1O95521 474 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 METTL18O95568 372 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ECEL1O95672 775 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CPNE6O95741 557 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 AP2A1O95782 977 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 FGGP02679 453 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 FUCA1P04066 466 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 MPOP05164 745 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 APRTP07741 180 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 JMJD7P0C870 316 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 F3P13726 295 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ZNF8P17098 575 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 MSH3P20585 1137 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ITGALP20701 1170 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 IDSP22304 550 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 CXCR5P32302 372 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 ADRA1AP35348 466 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 PPARGP37231 505 aaPredicted RBP4.32□□□□□ -1.72
SNX1-205ENST00000559339 HALP42357 657 aa4.32□□□□□ -1.72
SNX1-205ENST00000559339 MLLT3P42568 568 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms