RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 E7EVH7 732 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 PSMD3O43242 534 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 SLC25A14O95258 325 aaPredicted RBP18.52■□□□□ 0.56
CASC4-209ENST00000559222 KRT14P02533 472 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 ALPPL2P10696 532 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 CKMT2P17540 419 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 ACTN2P35609 894 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 LMAN1P49257 510 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 DAB2P98082 770 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 CTBSQ01459 385 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 PEX6Q13608 980 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 PLA2G4EQ3MJ16 856 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 ANKRD22Q5VYY1 191 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 ZCCHC8Q6NZY4 707 aaKnown RBP18.52■□□□□ 0.56
CASC4-209ENST00000559222 DHRS13Q6UX07 377 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 PPP1R21Q6ZMI0 780 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 TAF8Q7Z7C8 310 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 GPBAR1Q8TDU6 330 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 PATE1Q8WXA2 126 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 CDH19Q9H159 772 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 FAM96AQ9H5X1 160 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 HOMER3Q9NSC5 361 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 SPATS2LQ9NUQ6 558 aaKnown RBP18.52■□□□□ 0.56
CASC4-209ENST00000559222 GPR34Q9UPC5 381 aa18.52■□□□□ 0.56
CASC4-209ENST00000559222 CTAGE9A4FU28 777 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 C2orf81A6NN90 581 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 B4DGG1 531 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 TPP1O14773 563 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 PRAMEF1O95521 474 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 EML2O95834 649 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 CKMT1AP12532 417 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 CDKN1CP49918 316 aaPredicted RBP18.51■□□□□ 0.55
CASC4-209ENST00000559222 ARSDP51689 593 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 GPS1Q13098 491 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 PERM1Q5SV97 790 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 SLC30A9Q6PML9 568 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 CRTC3Q6UUV7 619 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 RAB44Q7Z6P3 723 aaPredicted RBP18.51■□□□□ 0.55
CASC4-209ENST00000559222 GKN2Q86XP6 184 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 PHYKPLQ8IUZ5 450 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 FAM181AQ8N9Y4 354 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 ZNF778Q96MU6 729 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 VPS35Q96QK1 796 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 NAP1L3Q99457 506 aaPredicted RBP18.51■□□□□ 0.55
CASC4-209ENST00000559222 DUSP23Q9BVJ7 150 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 VPS18Q9P253 973 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 GULP1Q9UBP9 304 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 SLC2A6Q9UGQ3 507 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 FEZ2Q9UHY8 353 aaPredicted RBP18.51■□□□□ 0.55
CASC4-209ENST00000559222 KLK13Q9UKR3 277 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 DOLKQ9UPQ8 538 aa18.51■□□□□ 0.55
CASC4-209ENST00000559222 APOBEC2Q9Y235 224 aaKnown RBP18.51■□□□□ 0.55
CASC4-209ENST00000559222 ASXL3Q9C0F0 2248 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 RP1P56715 2156 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 OR51F1A6NGY5 319 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 ERI2A8K979 691 aaKnown RBP18.5■□□□□ 0.55
CASC4-209ENST00000559222 NUAK1O60285 661 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 NOBOXO60393 691 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 RFPL3O75679 317 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 TMEM63AO94886 807 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 CRTAMO95727 393 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 ACP1P24666 158 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 CRADDP78560 199 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 CDH17Q12864 832 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 KCNJ11Q14654 390 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 GPRC6AQ5T6X5 926 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 PDPK2PQ6A1A2 396 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 SYT10Q6XYQ8 523 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 LINC00523Q86TU6 105 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 GALNT13Q8IUC8 556 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 DNAAF3Q8N9W5 541 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 FAM46DQ8NEK8 389 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 ADAMTS14Q8WXS8 1223 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 EIF2B3Q9NR50 452 aaKnown RBP18.5■□□□□ 0.55
CASC4-209ENST00000559222 TRNAU1APQ9NX07 287 aaKnown RBP18.5■□□□□ 0.55
CASC4-209ENST00000559222 TAAR2Q9P1P5 351 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 SLC23A2Q9UGH3 650 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 ZNHIT2Q9UHR6 403 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 RABGEF1Q9UJ41 708 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 KCNK6Q9Y257 313 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 SAR1BQ9Y6B6 198 aa18.5■□□□□ 0.55
CASC4-209ENST00000559222 CPED1A4D0V7 1026 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 MROH6A6NGR9 719 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 SRP72O76094 671 aaKnown RBP18.49■□□□□ 0.55
CASC4-209ENST00000559222 ACP5P13686 325 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 CTSCP53634 463 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 MAZP56270 477 aaKnown RBP18.49■□□□□ 0.55
CASC4-209ENST00000559222 SESN2P58004 480 aaPredicted RBP18.49■□□□□ 0.55
CASC4-209ENST00000559222 CHST15Q7LFX5 561 aaPredicted RBP18.49■□□□□ 0.55
CASC4-209ENST00000559222 EFL1Q7Z2Z2 1120 aaKnown RBP18.49■□□□□ 0.55
CASC4-209ENST00000559222 ZNF547Q8IVP9 402 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 IFI44Q8TCB0 444 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 ZNF398Q8TD17 642 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 CPT1BQ92523 772 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 TRIM39Q9HCM9 518 aa18.49■□□□□ 0.55
CASC4-209ENST00000559222 NLE1Q9NVX2 485 aaPredicted RBP18.49■□□□□ 0.55
CASC4-209ENST00000559222 CACNA1BQ00975 2339 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.48■□□□□ 0.55
CASC4-209ENST00000559222 FAM149AA5PLN7 773 aa18.48■□□□□ 0.55
CASC4-209ENST00000559222 GRID2O43424 1007 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms