RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MMP14P50281 582 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 ALCAMQ13740 583 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 LAMB3Q13751 1172 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 KRT33BQ14525 404 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 CTF1Q16619 201 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 IGSF11Q5DX21 431 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 C1orf141Q5JVX7 400 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 FNBP1LQ5T0N5 605 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 TYW3Q6IPR3 259 aaKnown RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 COLCA1Q6ZS62 124 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 TPRG1Q6ZUI0 275 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 VSIG1Q86XK7 387 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 TDRD5Q8NAT2 981 aaKnown RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 WFIKKN2Q8TEU8 576 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 LPGAT1Q92604 370 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 APBB2Q92870 758 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 TAAR8Q969N4 342 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 RMDN1Q96DB5 314 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 ZNF48Q96MX3 618 aaPredicted RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 TTC14Q96N46 770 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 RAB3IPQ96QF0 476 aaPredicted RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 SMC6Q96SB8 1091 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 HAUS8Q9BT25 410 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 SF3B5Q9BWJ5 86 aaKnown RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 PIGMQ9H3S5 423 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 DNAJC18Q9H819 358 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 MMP25Q9NPA2 562 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 PIH1D3Q9NQM4 214 aaKnown RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 DDX25Q9UHL0 483 aaKnown RBP4.41□□□□□ -1.7
CASC4-206ENST00000558847 ZNF521Q96K83 1311 aa4.41□□□□□ -1.7
CASC4-206ENST00000558847 A0A1W2PR77 199 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 TSPY2A6NKD2 308 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 MAGEB17A8MXT2 336 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 I6L893 689 aaPredicted RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 PPEF2O14830 753 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 CLGNO14967 610 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 LCATP04180 440 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 RPN1P04843 607 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 TSPY3P0CV98 308 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 TSPY8P0CW00 308 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 G6PDP11413 515 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 SCG2P13521 617 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 HOXB6P17509 224 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 C21orf33P30042 268 aaPredicted RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 BDKRB2P30411 391 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 AMTP48728 403 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 TMF1P82094 1093 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 TSPY1Q01534 308 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 PPATQ06203 517 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 MVPQ14764 893 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 PLCB4Q15147 1175 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 DECR1Q16698 335 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 AMZ1Q400G9 498 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 ZDHHC20Q5W0Z9 365 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 CST9LP1Q5W188 147 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 B3GNT6Q6ZMB0 384 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 HAUS6Q7Z4H7 955 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 CTU1Q7Z7A3 348 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 SLFN11Q7Z7L1 901 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 TTC30BQ8N4P2 665 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 ZNF548Q8NEK5 533 aaPredicted RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 HM13Q8TCT9 377 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 PTERQ96BW5 349 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 ARSGQ96EG1 525 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 FOXP1Q9H334 677 aaPredicted RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 ZWILCHQ9H900 591 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 CHMP1AQ9HD42 196 aaPredicted RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 ZBTB40Q9NUA8 1239 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 TRMT1Q9NXH9 659 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 GDE1Q9NZC3 331 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 STK26Q9P289 416 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 OSGIN1Q9UJX0 560 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 AGO1Q9UL18 857 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 WBP11Q9Y2W2 641 aaKnown RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 TMEM184BQ9Y519 407 aaPredicted RBP4.4□□□□□ -1.71
CASC4-206ENST00000558847 SQORQ9Y6N5 450 aa4.4□□□□□ -1.71
CASC4-206ENST00000558847 TIMM23O14925 209 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 KCNN4O15554 427 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 PRAMEF11O60813 436 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 TBX10O75333 385 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 RSL1D1O76021 490 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 FYNP06241 537 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 FGF2P09038 288 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 PRLRP16471 622 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 NR2F2P24468 414 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 EIF2S3P41091 472 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 MXI1P50539 228 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 CLCNKAP51800 687 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 ZNF41P51814 821 aaPredicted RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 PGGT1BP53609 377 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 HNRNPH2P55795 449 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 ROR1Q01973 937 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 RABEP1Q15276 862 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 EIF2S3LQ2VIR3 472 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 HIST2H2BCQ6DN03 193 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 HIST2H2BDQ6DRA6 164 aa4.39□□□□□ -1.71
CASC4-206ENST00000558847 DUS1LQ6P1R4 473 aaKnown RBP4.39□□□□□ -1.71
CASC4-206ENST00000558847 C8orf82Q6P1X6 216 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms