RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 SCARF2Q96GP6 870 aaPredicted RBP13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 TBATAQ96M53 351 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 ZSCAN5AQ9BUG6 496 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 BOCQ9BWV1 1114 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 DPEP2Q9H4A9 486 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 FAM96AQ9H5X1 160 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 LRRC40Q9H9A6 602 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 ARNT2Q9HBZ2 717 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 COL5A1P20908 1838 aaPredicted RBP13.7□□□□□ -0.22
TSPAN3-205ENST00000558745 GLYATL1P3A0A0U1RQE8 302 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 PSMD3O43242 534 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 LDB2O43679 373 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 ZNF189O75820 626 aaPredicted RBP13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 PRSS56P0CW18 603 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 FDFT1P37268 417 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 LMAN1P49257 510 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 VPS41P49754 854 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 DCDC1P59894 354 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 CCDC38Q502W7 563 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 CERCAMQ5T4B2 595 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 CHST15Q7LFX5 561 aaPredicted RBP13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 IFI44Q8TCB0 444 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 TRIM39Q9HCM9 518 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 RAD18Q9NS91 495 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 TAAR2Q9P1P5 351 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 PAK5Q9P286 719 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 PADI4Q9UM07 663 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 PKP3Q9Y446 797 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 SCN8AQ9UQD0 1980 aa13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 ARHGEF17Q96PE2 2063 aaPredicted RBP13.69□□□□□ -0.22
TSPAN3-205ENST00000558745 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 B4DGG1 531 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 E7EVH7 732 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 NOBOXO60393 691 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 TRIM16O95361 564 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 EML2O95834 649 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 ACTN2P35609 894 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 COILP38432 576 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 XIAPP98170 497 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 SEMA5AQ13591 1074 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 PEX6Q13608 980 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 SEPT6Q14141 434 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 NR0B2Q15466 257 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 PLA2G4EQ3MJ16 856 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 GALNT13Q8IUC8 556 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 GDAP1Q8TB36 358 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 ZNF398Q8TD17 642 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 CCDC97Q96F63 343 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 DNAJC1Q96KC8 554 aaKnown RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 CAPZA3Q96KX2 299 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 PPP1R2P1Q96PQ5 205 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 PLEKHG4BQ96PX9 1271 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 OR2M4Q96R27 311 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 TRNAU1APQ9NX07 287 aaKnown RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 NFKBIL1Q9UBC1 381 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 SLC23A2Q9UGH3 650 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 TTC7AQ9ULT0 858 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 KCNK6Q9Y257 313 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 ZKSCAN5Q9Y2L8 839 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 PCDHGA1Q9Y5H4 931 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 RP1P56715 2156 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 MYLKQ15746 1914 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
TSPAN3-205ENST00000558745 EME2A4GXA9 379 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 PGRMC1O00264 195 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 GRID2O43424 1007 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 NUAK1O60285 661 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 SUN1O94901 812 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 CRTAMO95727 393 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 KRT14P02533 472 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 APRTP07741 180 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ACP5P13686 325 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ACTR1BP42025 376 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 CDKN1CP49918 316 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ZNF140P52738 457 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 MAZP56270 477 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ACTR1AP61163 376 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 BASP1P80723 227 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 INSM1Q01101 510 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 TMEM115Q12893 351 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ILF3Q12906 894 aaKnown RBP eCLIP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 OGFOD3Q6PK18 319 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 LVRNQ6Q4G3 990 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 PPP1R21Q6ZMI0 780 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 DNAAF3Q8N9W5 541 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 GPR156Q8NFN8 814 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ZDHHC1Q8WTX9 485 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 GSDMCQ9BYG8 508 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 CDH19Q9H159 772 aa13.67□□□□□ -0.22
TSPAN3-205ENST00000558745 ASB8Q9H765 288 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms