RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 STX7O15400 261 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 KLK8O60259 260 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RNASEH1O60930 286 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 CLASP2O75122 1294 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 CDK14O94921 469 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 ESR1P03372 595 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RPS17P08708 135 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 MTHFD2P13995 350 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 PKMP14618 531 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 GPX3P22352 226 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 CALRP27797 417 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 EEF1DP29692 281 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 FMO4P31512 558 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 SCNN1BP51168 640 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 TIAL1Q01085 375 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RHDQ02161 417 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 CLCQ05315 142 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 SEMA3AQ14563 771 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RPS6KA2Q15349 733 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 OR4D1Q15615 310 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 PPP1R3AQ16821 1122 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 PFKFB4Q16877 469 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 UGT3A2Q3SY77 523 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 ADGRF1Q5T601 910 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 CLEC6AQ6EIG7 209 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 OGFOD2Q6N063 350 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 C8orf82Q6P1X6 216 aaPredicted RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RSPO2Q6UXX9 243 aaPredicted RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 ARPINQ7Z6K5 226 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 DENND1CQ8IV53 801 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 DDIASQ8IXT1 998 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 LPCAT1Q8NF37 534 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 OR4K2Q8NGD2 314 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 OR56A4Q8NGH8 313 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 HMGCLL1Q8TB92 370 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 ZUFSPQ96AP4 578 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 MYEOVQ96EZ4 313 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 ZFRQ96KR1 1074 aaKnown RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 B3GALT6Q96L58 329 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 MYRFLQ96LU7 910 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 PRICKLE1Q96MT3 831 aaPredicted RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 ZIC5Q96T25 663 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RBCK1Q9BYM8 510 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 MUC3BQ9H195 1237 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 AKTIPQ9H8T0 292 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 COPS7BQ9H9Q2 264 aaPredicted RBP7.22□□□□□ -1.25
VPS13C-206ENST00000558338 C8orf4Q9NR00 106 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RIC8BQ9NVN3 520 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 AP4S1Q9Y587 144 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 PCDHB1Q9Y5F3 818 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 RAI2Q9Y5P3 530 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 DNAJC15Q9Y5T4 150 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 SRCAPQ6ZRS2 3230 aa7.22□□□□□ -1.25
VPS13C-206ENST00000558338 TCRBV3S1A0A5B6 114 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 CAPN8A6NHC0 703 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 AQP12BA6NM10 295 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 E5RI56 91 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 E7ENX8 843 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 NR5A2O00482 541 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 FBP2O00757 339 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 COCHO43405 550 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 SNX2O60749 519 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 STC2O76061 302 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 TNFAIP8O95379 198 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 INHAP05111 366 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 ZCCHC18P0CG32 403 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 UROSP10746 265 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 SLC7A1P30825 629 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 MC4RP32245 332 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 PTGER3P43115 390 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 ALDH7A1P49419 539 aaKnown RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 PRMT2P55345 433 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 IL2P60568 153 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 SH3BP2P78314 561 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 MS4A2Q01362 244 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 INPP5AQ14642 412 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 NR6A1Q15406 480 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 CYTH1Q15438 398 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 PTPRNQ16849 979 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 LIN52Q52LA3 116 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 INO80DQ53TQ3 878 aaPredicted RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 PAQR3Q6TCH7 311 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 PRSS55Q6UWB4 352 aaPredicted RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 UGT2A3Q6UWM9 527 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 CERS6Q6ZMG9 384 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 AQP12AQ8IXF9 295 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 FAM126BQ8IXS8 530 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 AHI1Q8N157 1196 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 SDR16C5Q8N3Y7 309 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 MINDY1Q8N5J2 469 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 PCDH20Q8N6Y1 951 aaKnown RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 HJURPQ8NCD3 748 aaPredicted RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 CD99L2Q8TCZ2 262 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 ZNF483Q8TF39 744 aaPredicted RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 ZFAND2BQ8WV99 257 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 KCNJ9Q92806 393 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 TUBGCP3Q96CW5 907 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 GCNAQ96QF7 691 aa7.21□□□□□ -1.25
VPS13C-206ENST00000558338 UHRF1Q96T88 793 aaPredicted RBP7.21□□□□□ -1.25
VPS13C-206ENST00000558338 TRIM54Q9BYV2 358 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms