RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 VAV2P52735 878 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 UCNP55089 124 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 RWDD2BP57060 319 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 GABREP78334 506 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 NIPAL4Q0D2K0 466 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 ZBTB17Q13105 803 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 MPP3Q13368 585 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 UBAP2LQ14157 1087 aaKnown RBP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 ZNF569Q5MCW4 686 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 BROXQ5VW32 411 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 KAZNQ674X7 775 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 BBS12Q6ZW61 710 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 TSPAN33Q86UF1 283 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 CPNE8Q86YQ8 564 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 CDKL3Q8IVW4 592 aaPredicted RBP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 UBL4BQ8N7F7 174 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 ZNF248Q8NDW4 579 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 CCDC74AQ96AQ1 378 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 LIN37Q96GY3 246 aaPredicted RBP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 NSMCE3Q96MG7 304 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 LGR4Q9BXB1 951 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 GPR63Q9BZJ6 419 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 TMEM168Q9H0V1 697 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 SYNDIG1Q9H7V2 258 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 GLOD4Q9HC38 313 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 FAM153AQ9UHL3 310 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 PNMA8BQ9ULN7 279 aaPredicted RBP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 PCDHA3Q9Y5H8 950 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 LRP4O75096 1905 aa11.34□□□□□ -0.59
LINC00648-204ENST00000557749 ANKRD11Q6UB99 2663 aaPredicted RBP11.34□□□□□ -0.59
LINC00648-204ENST00000557749 URB1O60287 2271 aaKnown RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 RHPN2P1A8MT19 583 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 B4DGG1 531 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 D6RAR5 112 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 NTN3O00634 580 aaPredicted RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 NRDCO43847 1150 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 BRINP1O60477 761 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 ANXA9O76027 345 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 CLDN7O95471 211 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 ASMTLO95671 621 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 PRLP01236 227 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 MMP2P08253 660 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 HLA-DPA1P20036 260 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 PTPN3P26045 913 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 GSDMDP57764 484 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 HLTFQ14527 1009 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 PRPSAP1Q14558 356 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 OCLNQ16625 522 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 HENMT1Q5T8I9 393 aaKnown RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 PHYKPLQ8IUZ5 450 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 CCNJLQ8IV13 435 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 TRAM1L1Q8N609 369 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 CNTD1Q8N815 330 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 DTX3LQ8TDB6 740 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 HTR3CQ8WXA8 447 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 SH3KBP1Q96B97 665 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 QKIQ96PU8 341 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 PLEKHG4BQ96PX9 1271 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 RIOK2Q9BVS4 552 aaKnown RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 FSD1LQ9BXM9 530 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 TSGA10Q9BZW7 698 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 ZCCHC2Q9C0B9 1178 aaKnown RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 MRPL40Q9NQ50 206 aaKnown RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 TAAR2Q9P1P5 351 aa11.33□□□□□ -0.6
LINC00648-204ENST00000557749 AAR2Q9Y312 384 aaKnown RBP11.33□□□□□ -0.6
LINC00648-204ENST00000557749 SOWAHDA6NJG2 315 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 OR5K4A6NMS3 321 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 TAF4O00268 1085 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 PJA2O43164 708 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 RPLP0P05388 317 aaKnown RBP11.32□□□□□ -0.6
LINC00648-204ENST00000557749 VCLP18206 1134 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 CCKBRP32239 447 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 EIF2S3P41091 472 aaKnown RBP11.32□□□□□ -0.6
LINC00648-204ENST00000557749 ACTR1BP42025 376 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 INHBCP55103 352 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 ACTR1AP61163 376 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 GPLD1P80108 840 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 PDE1BQ01064 536 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 PERM1Q5SV97 790 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 DOK6Q6PKX4 331 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 PID1Q7Z2X4 250 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 SCAMP4Q969E2 229 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 COX14Q96I36 57 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 TRIB3Q96RU7 358 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 HERPUD2Q9BSE4 406 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 DPH1Q9BZG8 443 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 CARD9Q9H257 536 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 LRRN3Q9H3W5 708 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 EPB41L1Q9H4G0 881 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 LRIT1Q9P2V4 623 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 FEZ2Q9UHY8 353 aaPredicted RBP11.32□□□□□ -0.6
LINC00648-204ENST00000557749 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
LINC00648-204ENST00000557749 HYOU1Q9Y4L1 999 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms