RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 ERN2Q76MJ5 926 aaKnown RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 ATG9AQ7Z3C6 839 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 FOXRED2Q8IWF2 684 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 FBXO39Q8N4B4 442 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 TEX45Q8NA69 505 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 HM13Q8TCT9 377 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 SEPT1Q8WYJ6 367 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 CORO2AQ92828 525 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 INTS14Q96SY0 518 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 WDR77Q9BQA1 342 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 RTN4RQ9BZR6 473 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 SPRY4Q9C004 299 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 MMADHCQ9H3L0 296 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 KLHL31Q9H511 634 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 PPP1R3EQ9H7J1 279 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 NRIP3Q9NQ35 241 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 ACSS1Q9NUB1 689 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 TMEM45AQ9NWC5 275 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 AGO2Q9UKV8 859 aaKnown RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 ZNF644Q9H582 1327 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 COL3A1P02461 1466 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 ENO4A6NNW6 628 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 PSMD14O00487 310 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 CLIC2O15247 247 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 KIF1CO43896 1103 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 DDNO94850 711 aaPredicted RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 ZFYP08048 801 aaPredicted RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 ENO3P13929 434 aaPredicted RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 MAOAP21397 527 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 AVPR1AP37288 418 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 CRKLP46109 303 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 METAP2P50579 478 aaKnown RBP eCLIP4.35□□□□□ -1.71
PNN-206ENST00000557680 RAB28P51157 221 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 ADARP55265 1226 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 PROK1P58294 105 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 BPIFB3P59826 476 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 TUBB4BP68371 445 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 SRSF4Q08170 494 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 SREBF2Q12772 1141 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 ZNF268Q14587 947 aaPredicted RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 FAM98BQ52LJ0 330 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 NHSL2Q5HYW2 709 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 SIGIRRQ6IA17 410 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 PAPD4Q6PIY7 484 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 PET117Q6UWS5 81 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 OTOAQ7RTW8 1153 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 HAUS6Q7Z4H7 955 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 UBE2Q1Q7Z7E8 422 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 CENPVQ7Z7K6 275 aaPredicted RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 HACE1Q8IYU2 909 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 SIX6OS1Q8N1H7 587 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 BEST3Q8N1M1 668 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 SLC4A11Q8NBS3 891 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 MCUQ8NE86 351 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 ENGASEQ8NFI3 743 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 HMGCLL1Q8TB92 370 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 SCARB1Q8WTV0 552 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 RND1Q92730 232 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 KRT35Q92764 455 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 FAM162AQ96A26 154 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 NXNL1Q96CM4 212 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 HDAC11Q96DB2 347 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 ZNF558Q96NG5 402 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 DDOQ99489 341 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 MGME1Q9BQP7 344 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 WDR83Q9BRX9 315 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 HAUS8Q9BT25 410 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 RNF146Q9NTX7 359 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 TMEM184CQ9NVA4 438 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 TAS2R14Q9NYV8 317 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 MSRB1Q9NZV6 116 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 B3GALT5Q9Y2C3 310 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 RAI2Q9Y5P3 530 aa4.35□□□□□ -1.71
PNN-206ENST00000557680 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.35□□□□□ -1.71
PNN-206ENST00000557680 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 C19orf81C9J6K1 198 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 I6L893 689 aaPredicted RBP4.34□□□□□ -1.71
PNN-206ENST00000557680 M0QZ24 198 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 IPO8O15397 1037 aaKnown RBP4.34□□□□□ -1.71
PNN-206ENST00000557680 RNF8O76064 485 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 MT-ND3P03897 115 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 SUPT20HL2P0C7V6 817 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 AZGP1P25311 298 aaKnown RBP4.34□□□□□ -1.71
PNN-206ENST00000557680 HOXD9P28356 352 aaPredicted RBP4.34□□□□□ -1.71
PNN-206ENST00000557680 HNF4AP41235 474 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 CLK1P49759 484 aaKnown RBP4.34□□□□□ -1.71
PNN-206ENST00000557680 CDH12P55289 794 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 ACSM1Q08AH1 577 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 LASP1Q14847 261 aaKnown RBP4.34□□□□□ -1.71
PNN-206ENST00000557680 EFNB3Q15768 340 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 VWC2Q2TAL6 325 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 SUPT20HL1Q3ZLR7 823 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 CEP78Q5JTW2 689 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 C6orf10Q5SRN2 563 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 ARMC4Q5T2S8 1044 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 FCRLBQ6BAA4 426 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 LCN10Q6JVE6 187 aa4.34□□□□□ -1.71
PNN-206ENST00000557680 HEPHL1Q6MZM0 1159 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms