RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 KLHL8Q9P2G9 620 aaPredicted RBP16.55■□□□□ 0.24
NEK9-211ENST00000557673 TTC7AQ9ULT0 858 aaPredicted RBP16.55■□□□□ 0.24
NEK9-211ENST00000557673 PCDHGA4Q9Y5G9 962 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 RNF215Q9Y6U7 377 aa16.55■□□□□ 0.24
NEK9-211ENST00000557673 UNC13CQ8NB66 2214 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 PGRMC1O00264 195 aaKnown RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 KCNN4O15554 427 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 SUV39H1O43463 412 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 PGLSO95336 258 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 MMP2P08253 660 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 TCP1P17987 556 aaKnown RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 ITIH1P19827 911 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 NFKB1P19838 968 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 CES1P23141 567 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 CD68P34810 354 aaPredicted RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 MAPK10P53779 464 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
NEK9-211ENST00000557673 ACOX1Q15067 660 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 PTPRRQ15256 657 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 SLC14A2Q15849 920 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 CNGA3Q16281 694 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 CLPPQ16740 277 aaPredicted RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 LONRF2Q1L5Z9 754 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 PAPD7Q5XG87 772 aaKnown RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 C1orf54Q8WWF1 131 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 OR1E3Q8WZA6 343 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 IMP4Q96G21 291 aaKnown RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 MS4A14Q96JA4 679 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 FERMT1Q9BQL6 677 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 TDRD1Q9BXT4 1180 aaKnown RBP16.54■□□□□ 0.24
NEK9-211ENST00000557673 GLOD4Q9HC38 313 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 SCN8AQ9UQD0 1980 aa16.54■□□□□ 0.24
NEK9-211ENST00000557673 BOD1L1Q8NFC6 3051 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 A0A1W2PQ67 120 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TMEM202A6NGA9 273 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 B4DGG1 531 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.53■□□□□ 0.24
NEK9-211ENST00000557673 TERTO14746 1132 aaKnown RBP16.53■□□□□ 0.24
NEK9-211ENST00000557673 PPFIA2O75334 1257 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 STK10O94804 968 aaKnown RBP16.53■□□□□ 0.24
NEK9-211ENST00000557673 CPNE6O95741 557 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 FAM87AP0C7U9 286 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 CTPS1P17812 591 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 ITGB6P18564 788 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 LHCGRP22888 699 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 VIPR1P32241 457 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TRIM23P36406 574 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 CD86P42081 329 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 ETF1P62495 437 aaKnown RBP16.53■□□□□ 0.24
NEK9-211ENST00000557673 TBR1Q16650 682 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 ARMC12Q5T9G4 340 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 DENND2CQ68D51 928 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 KCTD16Q68DU8 428 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 ZFAND4Q86XD8 727 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 DTX1Q86Y01 620 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 SLITRK4Q8IW52 837 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 PELI3Q8N2H9 469 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 FUBP1Q96AE4 644 aaKnown RBP16.53■□□□□ 0.24
NEK9-211ENST00000557673 TADA1Q96BN2 335 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 RTP4Q96DX8 246 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 SPATA13Q96N96 652 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 SMIM14Q96QK8 99 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TMEM121Q9BTD3 319 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TRIM4Q9C037 500 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TMEM168Q9H0V1 697 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 SLC25A51Q9H1U9 297 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 GBA3Q9H227 469 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 WDR26Q9H7D7 661 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 KCTD5Q9NXV2 234 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 SMARCAL1Q9NZC9 954 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TRHDEQ9UKU6 1024 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 PHTF1Q9UMS5 762 aa16.53■□□□□ 0.24
NEK9-211ENST00000557673 TLN1Q9Y490 2541 aaKnown RBP16.53■□□□□ 0.24
NEK9-211ENST00000557673 A0A0U1RQS6 177 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 NPIPB15A6NHN6 443 aaPredicted RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 STMND1H3BQB6 276 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 HGSO14964 777 aaPredicted RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 ZNF185O15231 689 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 FZD6O60353 706 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 HEXIM1O94992 359 aaKnown RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 PDHA1P08559 390 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 CA4P22748 312 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 ATP1A2P50993 1020 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 GDF10P55107 478 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 PEX6Q13608 980 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 DRICH1Q6PGQ1 229 aaPredicted RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 TSPAN33Q86UF1 283 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 VASH2Q86V25 355 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 PRELID2Q8N945 189 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 ACTRT1Q8TDG2 376 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 PIH1D2Q8WWB5 315 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 NUS1Q96E22 293 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 COQ10AQ96MF6 247 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 MCCC1Q96RQ3 725 aaPredicted RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 NAP1L3Q99457 506 aaPredicted RBP16.52■□□□□ 0.24
NEK9-211ENST00000557673 SLC25A18Q9H1K4 315 aa16.52■□□□□ 0.24
NEK9-211ENST00000557673 CYP4F12Q9HCS2 524 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms