RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 GALNT2Q10471 571 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 GRIK3Q13003 919 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 PDE1CQ14123 709 aaPredicted RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 MMEL1Q495T6 779 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 PAN2Q504Q3 1202 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 ADGRF1Q5T601 910 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 AGAP9Q5VTM2 703 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 IRAK1BP1Q5VVH5 260 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 TWF2Q6IBS0 349 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 ANO7Q6IWH7 933 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 PRMT9Q6P2P2 845 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 EPGNQ6UW88 154 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 DSTYKQ6XUX3 929 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 CYP4V2Q6ZWL3 525 aaPredicted RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 EFL1Q7Z2Z2 1120 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 PIGZQ86VD9 579 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 KCNMB4Q86W47 210 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 TTC30AQ86WT1 665 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 DEFB106AQ8N104 65 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 BBS5Q8N3I7 341 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 GALNT15Q8N3T1 639 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 C12orf29Q8N999 325 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 PCYOX1LQ8NBM8 494 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 CEP70Q8NHQ1 597 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 TTC8Q8TAM2 541 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SLC2A14Q8TDB8 520 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SLC26A7Q8TE54 656 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 FRS2Q8WU20 508 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 PTPRN2Q92932 1015 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SMARCD1Q96GM5 515 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 CPB2Q96IY4 423 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SAMD11Q96NU1 681 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 HAPLN3Q96S86 360 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 MRPL57Q9BQC6 102 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 MRPL45Q9BRJ2 306 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 C17orf80Q9BSJ5 609 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 KIFC1Q9BW19 673 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SGPP1Q9BX95 441 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 TRIM4Q9C037 500 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 EPB41L1Q9H4G0 881 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 MINDY3Q9H8M7 445 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 ALG13Q9NP73 1137 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 DMAP1Q9NPF5 467 aaPredicted RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 FBXO6Q9NRD1 293 aaPredicted RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SNX15Q9NRS6 342 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 VPS45Q9NRW7 570 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 C20orf96Q9NUD7 363 aaPredicted RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 FAM49BQ9NUQ9 324 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 OXSMQ9NWU1 459 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SEPT10Q9P0V9 454 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 DLGAP2Q9P1A6 1054 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 NKX1-2Q9UD57 310 aaPredicted RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SLC7A8Q9UHI5 535 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 CNOT6Q9ULM6 557 aaKnown RBP6.13□□□□□ -1.43
CPSF2-205ENST00000556622 GIT1Q9Y2X7 761 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 LAMA3Q16787 3333 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 GBF1Q92538 1859 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 TANC1Q9C0D5 1861 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 MICAL3Q7RTP6 2002 aa6.13□□□□□ -1.43
CPSF2-205ENST00000556622 SZT2Q5T011 3432 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 A0A0U1RQF3 1178 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 A0A1W2PQU0 124 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 HEATR9A2RTY3 570 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 C7orf72A4D263 438 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 BBIP1A8MTZ0 92 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 A8MUI8 341 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 FOXO6A8MYZ6 492 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 PRR5-ARHGAP8B1AHC4 643 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 H3BNX3 289 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 ARNTLO00327 626 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 CYB561D2O14569 222 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 CASQ2O14958 399 aaPredicted RBP6.12□□□□□ -1.43
CPSF2-205ENST00000556622 TBX1O43435 398 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 DENRO43583 198 aaKnown RBP6.12□□□□□ -1.43
CPSF2-205ENST00000556622 CREB3O43889 395 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 MGEA5O60502 916 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 GPC4O75487 556 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 BANF1O75531 89 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 GRAP2O75791 330 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 RECQL4O94761 1208 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 PAPSS2O95340 614 aaPredicted RBP6.12□□□□□ -1.43
CPSF2-205ENST00000556622 TNFAIP8O95379 198 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 C1QAP02745 245 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 LTFP02788 710 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 ALDOAP04075 364 aaKnown RBP6.12□□□□□ -1.43
CPSF2-205ENST00000556622 RB1P06400 928 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 THP07101 528 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 CELA3BP08861 270 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 KITP10721 976 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 FGF3P11487 239 aaPredicted RBP6.12□□□□□ -1.43
CPSF2-205ENST00000556622 COX4I1P13073 169 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 ME2P23368 584 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 ADORA2BP29275 332 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 CCR1P32246 355 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 RENBPP51606 427 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 KPNA1P52294 538 aaPredicted RBP6.12□□□□□ -1.43
CPSF2-205ENST00000556622 MTTPP55157 894 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 LILRA4P59901 499 aa6.12□□□□□ -1.43
CPSF2-205ENST00000556622 RAB10P61026 200 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms