RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ATXN10Q9UBB4 475 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 SHOC2Q9UQ13 582 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 PCDHGA3Q9Y5H0 932 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 ATMQ13315 3056 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 B8ZZF3 427 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 STMND1H3BQB6 276 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 GRID2O43424 1007 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 NUAK1O60285 661 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 MFAP3LO75121 409 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 DYNLT1P63172 113 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 NFATC2Q13469 925 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 SKOR2Q2VWA4 1001 aaPredicted RBP22.36■■□□□ 1.17
ACTN1-220ENST00000556433 LINC00303Q3SY05 128 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 ZNF648Q5T619 568 aaPredicted RBP22.36■■□□□ 1.17
ACTN1-220ENST00000556433 ART4Q93070 314 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 PMEPA1Q969W9 287 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 SH3KBP1Q96B97 665 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 OLFM3Q96PB7 478 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 BRD8Q9H0E9 1235 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 MAGEE1Q9HCI5 957 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 ARFGAP3Q9NP61 516 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 SARS2Q9NP81 518 aaKnown RBP22.36■■□□□ 1.17
ACTN1-220ENST00000556433 OCIAD1Q9NX40 245 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 SLC39A1Q9NY26 324 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 HYOU1Q9Y4L1 999 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 PCDHGA4Q9Y5G9 962 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 CFAP46Q8IYW2 2715 aa22.36■■□□□ 1.17
ACTN1-220ENST00000556433 DUX1O43812 170 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 SLC25A14O95258 325 aaPredicted RBP22.35■■□□□ 1.17
ACTN1-220ENST00000556433 ZNF8P17098 575 aaPredicted RBP22.35■■□□□ 1.17
ACTN1-220ENST00000556433 SLC1A1P43005 524 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 ARSDP51689 593 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 CDK18Q07002 472 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 ZNF569Q5MCW4 686 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 SNAP47Q5SQN1 464 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 TMC3Q7Z5M5 1100 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 SLC9B2Q86UD5 537 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 RHOT1Q8IXI2 618 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 EXD3Q8N9H8 876 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 GPR26Q8NDV2 337 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 NCSTNQ92542 709 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 EXTL1Q92935 676 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 ARHGAP9Q9BRR9 750 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 HERPUD2Q9BSE4 406 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 GPR63Q9BZJ6 419 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 OR2AG1Q9H205 316 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 TRIM39Q9HCM9 518 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 DDX56Q9NY93 547 aaKnown RBP22.35■■□□□ 1.17
ACTN1-220ENST00000556433 PDP2Q9P2J9 529 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 B3GALT1Q9Y5Z6 326 aa22.35■■□□□ 1.17
ACTN1-220ENST00000556433 EFCAB7A8K855 629 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 A8MU76 341 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 SLC4A1P02730 911 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 SLC2A4P14672 509 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 WT1P19544 449 aaPredicted RBP22.34■■□□□ 1.17
ACTN1-220ENST00000556433 TEX44Q53QW1 395 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 CCDC70Q6NSX1 233 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 MFSD7Q6UXD7 560 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 FAM129CQ86XR2 697 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 SPATA22Q8NHS9 363 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 NKD1Q969G9 470 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 TADA1Q96BN2 335 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 ZSCAN5AQ9BUG6 496 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 DDA1Q9BW61 102 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 GLOD4Q9HC38 313 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 RAD18Q9NS91 495 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 ZNF711Q9Y462 761 aa22.34■■□□□ 1.17
ACTN1-220ENST00000556433 KIR2DS5A0A0G2JLQ3 304 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 A0A0G2JNG1 304 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 A6NCN8 305 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 OR5K4A6NMS3 321 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 B4E171 279 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 J3QKU1 62 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 KIR2DS3K7RE56 304 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 MT-CYBP00156 380 aaPredicted RBP22.33■■□□□ 1.17
ACTN1-220ENST00000556433 ITGB2P05107 769 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 F3P13726 295 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 COMTP21964 271 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 TSPAN7P41732 249 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 MAPK9P45984 424 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 ATP1A2P50993 1020 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 KIR2DS5Q14953 304 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 WDR74Q6RFH5 385 aaPredicted RBP22.33■■□□□ 1.17
ACTN1-220ENST00000556433 XKR5Q6UX68 686 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 ADGRG6Q86SQ4 1221 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 PHYKPLQ8IUZ5 450 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 TRAM1L1Q8N609 369 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.33■■□□□ 1.17
ACTN1-220ENST00000556433 ASPSCR1Q9BZE9 553 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 TSPY26PQ9H489 355 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 PRDM8Q9NQV8 689 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 KLC4Q9NSK0 619 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 INTUQ9ULD6 942 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 PIEZO2Q9H5I5 2752 aa22.33■■□□□ 1.17
ACTN1-220ENST00000556433 ZFC3H1O60293 1989 aaKnown RBP22.32■■□□□ 1.16
ACTN1-220ENST00000556433 SPOPO43791 374 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 PMPCBO75439 489 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 NDST3O95803 873 aa22.32■■□□□ 1.16
ACTN1-220ENST00000556433 NOP2P46087 812 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms