RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PRKAG1P54619 331 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 SPIBQ01892 262 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TNFAIP8L3Q5GJ75 292 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 GCNT6Q5T4J0 391 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 HECTD2Q5U5R9 776 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ZYG11AQ6WRX3 759 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 XYLT1Q86Y38 959 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 GPALPP1Q8IXQ4 340 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 OR5B17Q8NGF7 314 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 COL26A1Q96A83 441 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TAPBPLQ9BX59 468 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TM6SF2Q9BZW4 377 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 CD248Q9HCU0 757 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 COQ4Q9Y3A0 265 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PCDHGB1Q9Y5G3 927 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 RAI2Q9Y5P3 530 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 LYVE1Q9Y5Y7 322 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 KLHL33A6NCF5 533 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 FADS2P1A8MWK0 482 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 MT-CO1P00395 513 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 C2P06681 752 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 MYBPC3Q14896 1274 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TARBP2Q15633 366 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ZNF311Q5JNZ3 666 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 C9orf64Q5T6V5 341 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 DENND5AQ6IQ26 1287 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 NMD3Q96D46 503 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 SGK2Q9HBY8 427 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 RAB26Q9ULW5 256 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3DA0A087WVF3 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3IA0A087WXS9 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3EA0A087X179 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3KA0A087X1G2 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3FA6NER0 549 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 CAPN14A8MX76 684 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3LB9A6J9 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 PGK1P00558 417 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 IFNW1P05000 195 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3HP0C7X1 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 HNF4AP41235 474 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 AP1S2P56377 157 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TAS2R50P59544 299 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 RPL26P61254 145 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TAF1AQ15573 450 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 CCNYL2Q5T2Q4 361 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 EEF1DP3Q658K8 133 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3GQ6DHY5 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3CQ6IPX1 549 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 FUT10Q6P4F1 479 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 FAM171BQ6P995 826 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 CES3Q6UWW8 571 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 PAMR1Q6UXH9 720 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ATCAYQ86WG3 371 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D3Q8IZP1 549 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 POU5F2Q8N7G0 328 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 NIPA2Q8N8Q9 360 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 OR4A15Q8NGL6 344 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 BTBD9Q96Q07 612 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 EFCAB11Q9BUY7 163 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ZCWPW1Q9H0M4 648 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 EHD3Q9NZN3 535 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 E9PAM4 449 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 NTRK1P04629 796 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 MNDAP41218 407 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 PTPN5P54829 565 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 CCDC157Q569K6 752 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ADGRD1Q6QNK2 874 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ARHGAP36Q6ZRI8 547 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 DQX1Q8TE96 717 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ART5Q96L15 291 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 TBC1D10AQ9BXI6 508 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 DDX18Q9NVP1 670 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 ZNF282Q9UDV7 671 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 SEC14L3Q9UDX4 400 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 STXBP5LQ9Y2K9 1186 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 A0A1W2PQ72 361 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 INSIG1O15503 277 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 CORO1AP31146 461 aaKnown RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 PRCCQ92733 491 aaPredicted RBP10.66□□□□□ -0.7
ACTN1-216ENST00000556083 SLC47A1Q96FL8 570 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 SHDQ96IW2 340 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 SNX27Q96L92 541 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 PADI3Q9ULW8 664 aa10.66□□□□□ -0.7
ACTN1-216ENST00000556083 KCNU1A8MYU2 1149 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ERAL1O75616 437 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 GIMD1P0DJR0 217 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 GNSP15586 552 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PBX1P40424 430 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CASP5P51878 434 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 ZNF280AP59817 542 aaPredicted RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 EIF5AP63241 154 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 CAP1Q01518 475 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 SPRYD7Q5W111 196 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 MON1BQ7L1V2 547 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 PCDH20Q8N6Y1 951 aaKnown RBP10.65□□□□□ -0.7
ACTN1-216ENST00000556083 MCRS1Q96EZ8 462 aa10.65□□□□□ -0.7
ACTN1-216ENST00000556083 MPP4Q96JB8 637 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms