RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TMEM35BQ8NCS4 154 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 OR10G6Q8NH81 332 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 NUS1Q96E22 293 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 OR2M4Q96R27 311 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 NCAPGQ9BPX3 1015 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 GSX2Q9BZM3 304 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 ULBP3Q9BZM4 244 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 BRD8Q9H0E9 1235 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 ATP13A3Q9H7F0 1226 aa9.02□□□□□ -0.97
PRKCH-218ENST00000555628 SARS2Q9NP81 518 aaKnown RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 METTL5Q9NRN9 209 aaKnown RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 PHPT1Q9NRX4 125 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 UBA2Q9UBT2 640 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-218ENST00000555628 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 ZNF469Q96JG9 3925 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SMC2O95347 1197 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 CBX6O95503 412 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 CYP11B1P15538 503 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 TNFAIP3P21580 790 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SERPINA4P29622 427 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 ETV3P41162 512 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 PGDP52209 483 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 GFERP55789 205 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 DPTQ07507 201 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 PTP4A2Q12974 167 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 DNASE1L3Q13609 305 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 IL10RAQ13651 578 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 CDO1Q16878 200 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 UGT8Q16880 541 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SNAP47Q5SQN1 464 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 JMJD6Q6NYC1 403 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-218ENST00000555628 TECPR1Q7Z6L1 1165 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SRLQ86TD4 932 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 NOP9Q86U38 636 aaKnown RBP9.01□□□□□ -0.97
PRKCH-218ENST00000555628 RXFP2Q8WXD0 754 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 RNF31Q96EP0 1072 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 RUFY1Q96T51 708 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 BARD1Q99728 777 aaKnown RBP9.01□□□□□ -0.97
PRKCH-218ENST00000555628 SUDS3Q9H7L9 328 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-218ENST00000555628 MOSPD1Q9UJG1 213 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 NIPBLQ6KC79 2804 aaeCLIP9.01□□□□□ -0.97
PRKCH-218ENST00000555628 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
PRKCH-218ENST00000555628 PCNX1Q96RV3 2341 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ELOA3CA0A087WX78 387 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 LILRA5A6NI73 299 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ELOA3DA6NLF2 546 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 A8MX80 341 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 TIAF1O95411 115 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 FGF5P12034 268 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 MMP8P22894 467 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 NFKBIAP25963 317 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ERCC5P28715 1186 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 EPHB2P29323 1055 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 PPP1R2P41236 205 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 GARSP41250 739 aaKnown RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 IDH3AP50213 366 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 GSCP56915 257 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 UBE2IP63279 158 aaKnown RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 HHEXQ03014 270 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 LRP8Q14114 963 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 ACOX1Q15067 660 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 PTPRRQ15256 657 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 EXOC3L4Q17RC7 722 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ELOA3BQ3SY89 546 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 CRB2Q5IJ48 1285 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ISM2Q6H9L7 571 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 KLHL10Q6JEL2 608 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 IYDQ6PHW0 289 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ADAMTSL4Q6UY14 1074 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 GBP6Q6ZN66 633 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 RFLNAQ6ZTI6 216 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 Q6ZVL8 140 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ARHGAP12Q8IWW6 846 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 SLC34A3Q8N130 599 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 RBMXL3Q8N7X1 1067 aaKnown RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 ELOA3Q8NG57 546 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ADAMTS17Q8TE56 1095 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 CT55Q8WUE5 264 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 PDCD6IPQ8WUM4 868 aaKnown RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 C19orf60Q96EN9 201 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 COX14Q96I36 57 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 C9orf72Q96LT7 481 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 MCCC1Q96RQ3 725 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 RANBP9Q96S59 729 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 SLC38A3Q99624 504 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 NAA15Q9BXJ9 866 aaKnown RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 TWSG1Q9GZX9 223 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 ACTL8Q9H568 366 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 AKIRIN1Q9H9L7 192 aaPredicted RBP9□□□□□ -0.97
PRKCH-218ENST00000555628 TBC1D29Q9UFV1 150 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 DNAJC12Q9UKB3 198 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 MKL2Q9ULH7 1088 aa9□□□□□ -0.97
PRKCH-218ENST00000555628 TCRBV5S1A1TA0A578 114 aa8.99□□□□□ -0.97
PRKCH-218ENST00000555628 BICDL2A1A5D9 508 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms