RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 CES1P23141 567 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 F8A1P23610 371 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 CCNCP24863 283 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ZNF165P49910 485 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 EPHB1P54762 984 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 GFERP55789 205 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ITKQ08881 620 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 MAP7Q14244 749 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 KRT81Q14533 505 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 KIR2DS5Q14953 304 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 QPCTQ16769 361 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ATP13A4Q4VNC1 1196 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ATP1A1-AS1Q5TC04 95 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 TIGD7Q6NT04 549 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-208ENST00000555576 SLC9B2Q86UD5 537 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUBB3-208ENST00000555576 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-208ENST00000555576 NCSTNQ92542 709 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 NUP85Q9BW27 656 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 EPB41L1Q9H4G0 881 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 UCK1Q9HA47 277 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 PCDH9Q9HC56 1237 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 RBM22Q9NW64 420 aaKnown RBP eCLIP13.11□□□□□ -0.31
TUBB3-208ENST00000555576 SCHIP1Q9P0W5 487 aaPredicted RBP13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ANKMY1Q9P2S6 941 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ATXN10Q9UBB4 475 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 CPNE7Q9UBL6 633 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 ANAPC2Q9UJX6 822 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
TUBB3-208ENST00000555576 C1orf232A0A0U1RR37 186 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 RGSL1A5PLK6 1076 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 ZNF28P17035 718 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 ZNF8P17098 575 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 MAN1A1P33908 653 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 PBX1P40424 430 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 CLCNKAP51800 687 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 GBE1Q04446 702 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 SLC10A2Q12908 348 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 NR1I3Q14994 352 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 IGFBP7Q16270 282 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 IFI16Q16666 785 aaKnown RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 SH3KBP1Q96B97 665 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 HDAC11Q96DB2 347 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 ABHD17AQ96GS6 310 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 PLEKHG4BQ96PX9 1271 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 EFHD1Q9BUP0 239 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 CARD9Q9H257 536 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 FAM83DQ9H4H8 585 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 TMEM63CQ9P1W3 806 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 KLHL3Q9UH77 587 aa13.1□□□□□ -0.31
TUBB3-208ENST00000555576 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
TUBB3-208ENST00000555576 A0A087X0T9 212 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 A0A1W2PQJ5 194 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 GOLGA6L3A6NEY3 463 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 ANKRD66B4E2M5 251 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 CHUKO15111 745 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 POLR1CO15160 346 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 GRID2O43424 1007 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 FAM228BP0C875 321 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 SLC2A4P14672 509 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 CA4P22748 312 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 MAPK9P45984 424 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 DCDC1P59894 354 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 ZBTB17Q13105 803 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 UBAP2LQ14157 1087 aaKnown RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 ZNF648Q5T619 568 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 CNTD1Q8N815 330 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 APOBEC4Q8WW27 367 aaKnown RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 SYN2Q92777 582 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 C9orf72Q96LT7 481 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 TRIB3Q96RU7 358 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 BRD8Q9H0E9 1235 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 NFKBIL1Q9UBC1 381 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-208ENST00000555576 SLC23A2Q9UGH3 650 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 SLC30A1Q9Y6M5 507 aa13.09□□□□□ -0.31
TUBB3-208ENST00000555576 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 SNX2O60749 519 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 FURINP09958 794 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 BRAFP15056 766 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 CD86P42081 329 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 TAS2R40P59535 323 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 IQCB1Q15051 598 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 DEFB109BQ30KR1 87 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
TUBB3-208ENST00000555576 TDRD12Q587J7 1177 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms