RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SEL1L2Q5TEA6 688 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 PDPK2PQ6A1A2 396 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 RANBP10Q6VN20 620 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 ZNF662Q6ZS27 426 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 Q8N9G6 341 aaPredicted RBP20.3■□□□□ 0.84
VTI1B-205ENST00000555543 OR6C4Q8NGE1 309 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 TMEM121Q9BTD3 319 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 GRPEL1Q9HAV7 217 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 IL26Q9NPH9 171 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 HACD3Q9P035 362 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 LRIT1Q9P2V4 623 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 APPL1Q9UKG1 709 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 ENTPD2Q9Y5L3 495 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 AK5Q9Y6K8 562 aa20.3■□□□□ 0.84
VTI1B-205ENST00000555543 ZFC3H1O60293 1989 aaKnown RBP20.3■□□□□ 0.84
VTI1B-205ENST00000555543 GAPDHSO14556 408 aaPredicted RBP20.29■□□□□ 0.84
VTI1B-205ENST00000555543 NUDT21O43809 227 aaKnown RBP20.29■□□□□ 0.84
VTI1B-205ENST00000555543 NUAK1O60285 661 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 BRINP1O60477 761 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 MTX2O75431 263 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 EML2O95834 649 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 MPOP05164 745 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 CA5AP35218 305 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 LRP8Q14114 963 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 SPIDRQ14159 915 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 SPARCL1Q14515 664 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 PTPRCAPQ14761 206 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 ATP13A5Q4VNC0 1218 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 CHST15Q7LFX5 561 aaPredicted RBP20.29■□□□□ 0.84
VTI1B-205ENST00000555543 SPRED1Q7Z699 444 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 ADGRG6Q86SQ4 1221 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 PHYKPLQ8IUZ5 450 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 CCNJLQ8IV13 435 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 KLHDC8BQ8IXV7 354 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 ARL14Q8N4G2 192 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 WDR48Q8TAF3 677 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 ATXN7L3BQ96GX2 97 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 CARD9Q9H257 536 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 KCNK6Q9Y257 313 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 AAR2Q9Y312 384 aaKnown RBP20.29■□□□□ 0.84
VTI1B-205ENST00000555543 ARL5AQ9Y689 179 aa20.29■□□□□ 0.84
VTI1B-205ENST00000555543 PMS2P1A4D2B8 440 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 D6RAR5 112 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 METTL18O95568 372 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 ACP5P13686 325 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 MSLNQ13421 630 aaPredicted RBP20.28■□□□□ 0.84
VTI1B-205ENST00000555543 PRPSAP1Q14558 356 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 DENND5AQ6IQ26 1287 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 ARHGEF18Q6ZSZ5 1173 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 B3GNT8Q7Z7M8 397 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 SLC13A5Q86YT5 568 aaPredicted RBP20.28■□□□□ 0.84
VTI1B-205ENST00000555543 VPS35Q96QK1 796 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 GFM1Q96RP9 751 aaKnown RBP20.28■□□□□ 0.84
VTI1B-205ENST00000555543 LRRN3Q9H3W5 708 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 RMI1Q9H9A7 625 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 TRIM39Q9HCM9 518 aa20.28■□□□□ 0.84
VTI1B-205ENST00000555543 GRID2O43424 1007 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 TLX3O43711 291 aaPredicted RBP20.27■□□□□ 0.84
VTI1B-205ENST00000555543 LIASO43766 372 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 ZNF189O75820 626 aaPredicted RBP20.27■□□□□ 0.84
VTI1B-205ENST00000555543 PNLIPP16233 465 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 SPAM1P38567 509 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 GABREP78334 506 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 RPS6KA1Q15418 735 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 CRTC3Q6UUV7 619 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 FAM151BQ6UXP7 276 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 ZNF438Q7Z4V0 828 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 ALS2CR12Q96Q35 445 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 TBL1YQ9BQ87 522 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 TBC1D29Q9UFV1 150 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 ATXN7L1Q9ULK2 861 aaPredicted RBP20.27■□□□□ 0.84
VTI1B-205ENST00000555543 PPP2R2CQ9Y2T4 447 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 KCTD3Q9Y597 815 aa20.27■□□□□ 0.84
VTI1B-205ENST00000555543 NBEAQ8NFP9 2946 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 ZNF106Q9H2Y7 1883 aaKnown RBP20.26■□□□□ 0.83
VTI1B-205ENST00000555543 CHUKO15111 745 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 B4GALNT1Q00973 533 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 OASLQ15646 514 aaKnown RBP20.26■□□□□ 0.83
VTI1B-205ENST00000555543 CHRNA6Q15825 494 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 C3orf38Q5JPI3 329 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 KCTD11Q693B1 232 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 TMPRSS9Q7Z410 1059 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 TAB3Q8N5C8 712 aaPredicted RBP20.26■□□□□ 0.83
VTI1B-205ENST00000555543 RTP4Q96DX8 246 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 FOXP3Q9BZS1 431 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 POLR1BQ9H9Y6 1135 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 SATB2Q9UPW6 733 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 PKP3Q9Y446 797 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 KIF26BQ2KJY2 2108 aa20.26■□□□□ 0.83
VTI1B-205ENST00000555543 TRBV23OR9-2A0A075B6M9 112 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 GLYATL1P3A0A0U1RQE8 302 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 A6NCN8 305 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 RHPN2P1A8MT19 583 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 PPM1DO15297 605 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 STX7O15400 261 aaKnown RBP20.25■□□□□ 0.83
VTI1B-205ENST00000555543 B4GAT1O43505 415 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A9O60656 530 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A6P19224 532 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A1P22309 533 aa20.25■□□□□ 0.83
VTI1B-205ENST00000555543 UGT1A4P22310 534 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms