RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZCWPW2A0A1B0GU75 182 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 HHLA1C9JL84 531 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 SNAP23O00161 211 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 HOXC11O43248 304 aaPredicted RBP3.31□□□□□ -1.88
SNX6-204ENST00000555541 TNFSF14O43557 240 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 IGLV1-44P01699 117 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 CPOXP36551 454 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 CCT5P48643 541 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 CLK1P49759 484 aaKnown RBP3.31□□□□□ -1.88
SNX6-204ENST00000555541 GSTA3Q16772 222 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 TMEM35AQ53FP2 167 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 RAD9BQ6WBX8 426 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 ZNF704Q6ZNC4 412 aaPredicted RBP3.31□□□□□ -1.88
SNX6-204ENST00000555541 DPPA4Q7L190 304 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 STPG4Q8N801 248 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 OR52I2Q8NH67 350 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 ZNF473Q8WTR7 871 aaKnown RBP3.31□□□□□ -1.88
SNX6-204ENST00000555541 SLC38A5Q8WUX1 472 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 HVCN1Q96D96 273 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 RNF125Q96EQ8 232 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 SCLT1Q96NL6 688 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 ACOX2Q99424 681 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 EIF2AK1Q9BQI3 630 aaKnown RBP3.31□□□□□ -1.88
SNX6-204ENST00000555541 TFB2MQ9H5Q4 396 aaKnown RBP3.31□□□□□ -1.88
SNX6-204ENST00000555541 ERVMER34-1Q9H9K5 563 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 SLC52A3Q9NQ40 469 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 POLG2Q9UHN1 485 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 ACSL5Q9ULC5 683 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
SNX6-204ENST00000555541 IGLV5-45A0A087WSX0 123 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 CCDC196A0A1B0GTZ2 297 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 SYNGR3O43761 229 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 F9P00740 461 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 HOXC8P31273 242 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 HOXC9P31274 260 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 UBA7P41226 1012 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 CLDN20P56880 219 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 NEXNQ0ZGT2 675 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 GRIK2Q13002 908 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 DCST1Q5T197 706 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 C18orf63Q68DL7 685 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 TRPT1Q86TN4 253 aaKnown RBP3.3□□□□□ -1.88
SNX6-204ENST00000555541 GPR180Q86V85 440 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 WDR20Q8TBZ3 569 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 TM9SF4Q92544 642 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 HTRA1Q92743 480 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 APBB2Q92870 758 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 LINGO1Q96FE5 620 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 ZNF354BQ96LW1 612 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 PCGF1Q9BSM1 259 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 KIF9Q9HAQ2 790 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 RRN3Q9NYV6 651 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 FBXL2Q9UKC9 423 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 INTS6Q9UL03 887 aaKnown RBP3.3□□□□□ -1.88
SNX6-204ENST00000555541 KLHL20Q9Y2M5 609 aa3.3□□□□□ -1.88
SNX6-204ENST00000555541 DISP3Q9P2K9 1392 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 RRN3P2A6NIE6 340 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 EIF3DO15371 548 aaKnown RBP eCLIP3.29□□□□□ -1.88
SNX6-204ENST00000555541 NCAM2O15394 837 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 ZNF23P17027 643 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 SP100P23497 879 aaPredicted RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 APOBEC1P41238 236 aaKnown RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 PAFAH1B1P43034 410 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 AMPHP49418 695 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 PLIN5Q00G26 463 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 MYLK3Q32MK0 819 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 FAM69AQ5T7M9 428 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 SLC9C2Q5TAH2 1124 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 MAP7D3Q8IWC1 876 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 CCDC13Q8IYE1 715 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 NFKBIDQ8NI38 313 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 GTF3C6Q969F1 213 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 IGSF8Q969P0 613 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 ZNF689Q96CS4 500 aaPredicted RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 SENP5Q96HI0 755 aaPredicted RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 NR1H4Q96RI1 486 aaPredicted RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 SLC25A18Q9H1K4 315 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 PRKRIP1Q9H875 184 aaPredicted RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 UPF2Q9HAU5 1272 aaKnown RBP3.29□□□□□ -1.88
SNX6-204ENST00000555541 C2orf42Q9NWW7 574 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 HAO1Q9UJM8 370 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 CYP46A1Q9Y6A2 500 aa3.29□□□□□ -1.88
SNX6-204ENST00000555541 COL5A2P05997 1499 aaPredicted RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 FAM237AA0A1B0GTK4 181 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 C5orf60A6NFR6 353 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 FAM90A26D6RGX4 464 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 HS3ST1O14792 307 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 CTSVO60911 334 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 ABCD3P28288 659 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 AHRP35869 848 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 PIP4K2AP48426 406 aaPredicted RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 ARCN1P48444 511 aaKnown RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 CTCFP49711 727 aaPredicted RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 CSRP3P50461 194 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 EIF3BP55884 814 aaKnown RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 MAD2L1Q13257 205 aaPredicted RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 OLIG2Q13516 323 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 TECRLQ5HYJ1 363 aa3.28□□□□□ -1.88
SNX6-204ENST00000555541 CXorf66Q5JRM2 361 aaPredicted RBP3.28□□□□□ -1.88
SNX6-204ENST00000555541 INO80CQ6PI98 192 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms